Transcript Information: S_Transcript_51911.p1


Annotated TAIR IDAT3G10300.3
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3186436-3188071 | Forward length=335
E-Value3E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.3731325105038
Replicate 28.7418600133549
Replicate 37.8294634317172
Condition 2: 8 Hour
Replicate 119.715926896972
Replicate 218.361800298644
Replicate 320.310383095312
Condition 3: 24 Hour
Replicate 19.6859389062069
Replicate 211.688255026796
Replicate 39.7556964208468


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51911.p1 GENE.S_Transcript_51911~~S_Transcript_51911.p1 ORF type:5prime_partial len:318 (+),score=4.74,EF-hand_1|PF00036.28|0.00033,EF-hand_1|PF00036.28|4e+02,EF-hand_1|PF00036.28|2.7e-07,EF-hand_1|PF00036.28|8.3e+03,EF-hand_6|PF13405.2|0.00086,EF-hand_6|PF13405.2|2.2e+03,EF-hand_6|PF13405.2|2.9e-07,EF-hand_6|PF13405.2|1.3e+04,EF-hand_7|PF13499.2|0.0035,EF-hand_7|PF13499.2|1e-05,EF-hand_5|PF13202.2|0.00047,EF-hand_5|PF13202.2|5.6e-05,EF-hand_8|PF13833.2|1.2,EF-hand_8|PF13833.2|0.023,EF-hand_8|PF13833.2|0.52 S_Transcript_51911:3-956(+)
AGTATTTTCTCTCTCCTCAAATTCAAAAAAAAAAAAAAAAAAAAAACTCTCTTGATCATCAAAATGTCAGGTTACGGGTACCCCCACAACCCCCCGGGCTACGGCTACGGTGGGCCCCCGCCACCCACAGCCCAACCCTACGGCCAAGCACCCCCCTACGGTGGACCAGGCCCACAGCCCCCCACAGCCCAACCCTACAGCGGTGGGCCCCCCTCAGCCCCGCCCTACGAGAAGCCCCCGAAGGAGAACAAGCCCTACAGCGCGTCAGCATACGCGAACCCCCCACCAGGCGCGTCAGCATACGCGCACCCCCCACCAGACGCGTCGTCGGGGTACCCGTCGTATGCCGGGTCGGGTAGCCCGTTTTCGAGCTTGTTGCCGTCGACGTTCCCGCCGGGTACAGACCCGAATGTGGTGGCGTGTTTCCAGGTGGCGGACCAGGATGGGAGTGGGTTGATTGATGATAAGGAGCTTCAAAGAGCTTTGTCTTCTTATAATCAGAGCTTTAGCCTTCGCACTGTTCATCTCCTCATGTTCAATTTCACCAACTCCAATTCTCGCAAGATCGGTCCTAAGGAGTTTACATCTCTGTTCTACAGTCTGCAGTCCTGGAGGGAAATATTCGAGAGATTTGACAGAGACAGGAGTGGCAAGATAGATGTTGCAGAGCTGCGTGATGCCTTGTATAGCCTTGGATTTGCCGTCTCTCCTACAATTCTGGATTTGCTTGTCTCCAAGTTTGATAAGACTGGGGGGAAGAGTAGGGCTATCGAATATGATAACTTCATCGAGTGCTGCCTTACAGTAAAGGTACGTCTCTGTACTTGTTCTCTATTTAGTTATGCCCACCATGGTTTCGATTTCCCTATTGTAAACATGGGTTTGGAATTTTCCCTATTAACCCAATGTGCAATGTTAAATGTAGCATGTCGAAATCCACCAACTTCTGGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51911.p1 GENE.S_Transcript_51911~~S_Transcript_51911.p1 ORF type:5prime_partial len:318 (+),score=4.74,EF-hand_1|PF00036.28|0.00033,EF-hand_1|PF00036.28|4e+02,EF-hand_1|PF00036.28|2.7e-07,EF-hand_1|PF00036.28|8.3e+03,EF-hand_6|PF13405.2|0.00086,EF-hand_6|PF13405.2|2.2e+03,EF-hand_6|PF13405.2|2.9e-07,EF-hand_6|PF13405.2|1.3e+04,EF-hand_7|PF13499.2|0.0035,EF-hand_7|PF13499.2|1e-05,EF-hand_5|PF13202.2|0.00047,EF-hand_5|PF13202.2|5.6e-05,EF-hand_8|PF13833.2|1.2,EF-hand_8|PF13833.2|0.023,EF-hand_8|PF13833.2|0.52 S_Transcript_51911:3-956(+)
SIFSLLKFKKKKKKKTLLIIKMSGYGYPHNPPGYGYGGPPPPTAQPYGQAPPYGGPGPQPPTAQPYSGGPPSAPPYEKPPKENKPYSASAYANPPPGASAYAHPPPDASSGYPSYAGSGSPFSSLLPSTFPPGTDPNVVACFQVADQDGSGLIDDKELQRALSSYNQSFSLRTVHLLMFNFTNSNSRKIGPKEFTSLFYSLQSWREIFERFDRDRSGKIDVAELRDALYSLGFAVSPTILDLLVSKFDKTGGKSRAIEYDNFIECCLTVKVRLCTCSLFSYAHHGFDFPIVNMGLEFSLLTQCAMLNVACRNPPTSG*

Click here to download the sequence:
Link to NCBI Protein BLAST