Transcript Information: S_Transcript_519172.p1


Annotated TAIR IDAT5G17430.1
Annotated Gene NameIntegrase-type DNA-binding superfamily protein
Annotated Gene Symbol(s)BBM
Annotation TypeOrtholog
Chromosome Positionchr5:5742542-5745568 | Reverse length=584
E-Value1E-84
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.46964119826789
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.1333165386844
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_519172.p1 GENE.S_Transcript_519172~~S_Transcript_519172.p1 ORF type:internal len:170 (+),score=39.19,AP2|PF00847.16|3.1e-12 S_Transcript_519172:1-507(+)
GGTGGTGGCGGCGGCGGCGGCGGTGGTAGTGGAGAGAGGGAGGGTAGTTTGTCTGAGAGTAGTAGTAAACAACAAAGTGAAATACCGGGTGTGTCAAATAGTACTACTACTAGTAATGGCCAAGTTGATGTTCAAAGTGGTGCAATTGAGGCTGTGCCTAGGAAATCTATTGACACTTTTGGCCAACGCACCTCTATTTACCGTGGTGTCACAAGACATAGGTGGACAGGAAGATATGAAGCTCATCTATGGGATAATAGTTGTAGAAGAGAAGGGCAGACTCGCAAGGGCAGGCAAGTTTATTTGGGGGGTTATGACAAAGAAGAAAAAGCGGCTAGAGCTTATGATTTGGCTGCACTTAAATACTGGGGTACCACTACTACCACCAATTTCCCAATAAGTGACTATGAAAAAGAGATTGAAGAGATGACGCATATGACCCGCCAAGAATATGTGGCTTCTCTTCGAAGAAAGAGTAGTGGGTTTTCTCGTGGTGCATCAATTTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_519172.p1 GENE.S_Transcript_519172~~S_Transcript_519172.p1 ORF type:internal len:170 (+),score=39.19,AP2|PF00847.16|3.1e-12 S_Transcript_519172:1-507(+)
GGGGGGGGGSGEREGSLSESSSKQQSEIPGVSNSTTTSNGQVDVQSGAIEAVPRKSIDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQTRKGRQVYLGGYDKEEKAARAYDLAALKYWGTTTTTNFPISDYEKEIEEMTHMTRQEYVASLRRKSSGFSRGASIY

Click here to download the sequence:
Link to NCBI Protein BLAST