Transcript Information: S_Transcript_51933.p1


Annotated TAIR IDAT3G56680.1
Annotated Gene NameSingle-stranded nucleic acid binding R3H protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:20991537-20993446 | Forward length=353
E-Value4.3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1177.03114246306
Replicate 2164.71534669652
Replicate 3171.49218155545
Condition 2: 8 Hour
Replicate 1289.49947677094
Replicate 2281.21107276456
Replicate 3247.32223180026
Condition 3: 24 Hour
Replicate 1183.19777634167
Replicate 2158.89505157225
Replicate 3162.9413170062


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51933.p1 GENE.S_Transcript_51933~~S_Transcript_51933.p1 ORF type:complete len:365 (+),score=78.83,R3H|PF01424.18|1.1e-12,SUZ|PF12752.3|3.1e-10 S_Transcript_51933:402-1496(+)
ATGGATTCAATTAATCAGTCATCAGCAAACGGTGTCGTTTCGTCAATTGAGAAGGAGAACAACAACAGCGGCTGTGGTTCCTCAATGGTGGATCCTTTTCTCATCGAAGCGCTTCAAAACCCTCGCCATCGTCTTACCATTCTGAGGATGGAACTTGATATTCAGAAGTTCCTGCAGAATTCAGAGCAGCTGCAGTTTGAGTTCCAACATTTTCCTACTTCCTATCTAAGGCTTGCAGCACACAGGGTTGCTCAGCATTATGGTCTTCAGACCATGGTAATGGACAATCTCACAGATGGGCTAGGAAACAAAATTGTGGTTAGAAAAACAGCAGAGAGCAAGTATCCACCGATCTGTTTATCTGACATACCTGCTAAACAGTCAGAAAACAACAAACATGAGCAAGTTAAAATTGCTATAAGGCGTAGACCTTGTAGAACATCTTCTGGTGATGGATCTGACATGGGATCTAAACGCAACCAAGTCCGGAGTGTGGAAGAAGGGAAGGAGGAGTATGACAGAGCACGAGCACGCATTTTCAGTAGTCCTAGCAGTCCCACTTCAGATGACACATCATCTCAGATTGCAGCAGATGGAAAAGGTCTGTTTCCAAGCAAAGATGATAATGGTGGGTGCAGGAACTTCATCAGTGATTCAGAAAAGGCCATCAGTGTAAGGGATGTTGGTACTTCTTCTCGAGTTGCCATCTTCAAAGACAGAGAAAAGGATCGTACTGACCCAGACTATGACCGTAGTTATGATAGGTACATCAAGAGCTTCCCAACAGGTCAGAGATTTTTGGCCCCTTTCAACATGCCAAAGTTTCAACCTCCCTTTGTGCAGTATGATGCTGCTTTTCCTCAGATGGGCCAGATCCCTAGAGCACAAACCTCTCTCAACTATGTGCCCCCATCAGACCCGAGCGTGAACCATTATTGCAATGTTGGAGTGAATCAAGCTTCAAGGGATGGCATTTATATGTGGCCAAGTCCTGCTATGATGTATGCTCATTCATATGACCAACTTAGACACTCTGTTTTCCAGGCACCCTTCTATCAGCAGCCTCTCAGCTTCGACTACTCCCAGAACCACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51933.p1 GENE.S_Transcript_51933~~S_Transcript_51933.p1 ORF type:complete len:365 (+),score=78.83,R3H|PF01424.18|1.1e-12,SUZ|PF12752.3|3.1e-10 S_Transcript_51933:402-1496(+)
MDSINQSSANGVVSSIEKENNNSGCGSSMVDPFLIEALQNPRHRLTILRMELDIQKFLQNSEQLQFEFQHFPTSYLRLAAHRVAQHYGLQTMVMDNLTDGLGNKIVVRKTAESKYPPICLSDIPAKQSENNKHEQVKIAIRRRPCRTSSGDGSDMGSKRNQVRSVEEGKEEYDRARARIFSSPSSPTSDDTSSQIAADGKGLFPSKDDNGGCRNFISDSEKAISVRDVGTSSRVAIFKDREKDRTDPDYDRSYDRYIKSFPTGQRFLAPFNMPKFQPPFVQYDAAFPQMGQIPRAQTSLNYVPPSDPSVNHYCNVGVNQASRDGIYMWPSPAMMYAHSYDQLRHSVFQAPFYQQPLSFDYSQNH*

Click here to download the sequence:
Link to NCBI Protein BLAST