Transcript Information: S_Transcript_51940.p1


Annotated TAIR IDAT4G33210.1
Annotated Gene NameF-box family protein
Annotated Gene Symbol(s)SLOMO
Annotation TypeOrtholog
Chromosome Positionchr4:16015971-16020697 | Reverse length=990
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.796296724888
Replicate 227.511386005417
Replicate 328.449378776162
Condition 2: 8 Hour
Replicate 138.344193295283
Replicate 238.511150638945
Replicate 335.344890858381
Condition 3: 24 Hour
Replicate 131.013356488471
Replicate 226.771972068897
Replicate 324.884523129622


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51940.p1 GENE.S_Transcript_51940~~S_Transcript_51940.p1 ORF type:complete len:822 (+),score=120.18,LRR_4|PF12799.3|1e+04,LRR_4|PF12799.3|3.3e+02,LRR_4|PF12799.3|6.9e+02,LRR_4|PF12799.3|4.5,LRR_4|PF12799.3|5.8,LRR_4|PF12799.3|10,LRR_4|PF12799.3|4.4e+02,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|8.4e+02,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|18,LRR_4|PF12799.3|0.92,LRR_4|PF12799.3|4e+02,LRR_4|PF12799.3|32,LRR_4|PF12799.3|12,F-box|PF00646.29|1.8e-08,F-box|PF00646.29|1.5e+03,F-box|PF00646.29|5.9e+03,F-box|PF00646.29|4.7e+03,F-box|PF00646.29|7.3e+02,F-box-like|PF12937.3|3.9e-08,F-box-like|PF12937.3|4e+03,F-box-like|PF12937.3|5.3e+03,F-box-like|PF12937.3|1.4e+04,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|68,LRR_8|PF13855.2|6.7e+02,LRR_8|PF13855.2|5.6e+02,LRR_8|PF13855.2|0.28,LRR_8|PF13855.2|22,LRR_8|PF13855.2|7.4,LRR_8|PF13855.2|0.031,LRR_8|PF13855.2|24,LRR_8|PF13855.2|1.1e+02,LRR_8|PF13855.2|73 S_Transcript_51940:1134-3599(+)
ATGGAAAGGTATGTAAATAATGTCATCCATAATAACAACGAAGACGCTGATGAGGAATGTATTAATAATTCAGATATCGATGGCATGGAGATTCAGATGGATCTTTCAGATGATTTGCTGCATATGGTATTTTCTTTTCTAGGCCACGCTGACCTTTGTCGAGCTGCAATGGTCTGCAAGCAGTGGCGAACTGCTAGTGCTCATGAAGATTTTTGGCGTTACTTGAACTTTGAAAATCGGAACATTTCTTTGGCACAATTGGAAGATATTTGTCATCGGTATCCAAGGGCCATTGAAGTGAATCTTTGTGGTAATTCAAATATGCACATGCTTGTCGTGAGAGCAGTTTCGTTGCTGAGAAATCTTGAGTCTTTGACCTTAGGTAAAGGGCAAATAGGGGAAGCATTTTTCCATGCTGTGTCAGATTGTGCCTTGCTGAAGACTTTAATCGTTTGTGATGCTGCTCTTGGGAATGGTGCACAAGAGATATCTATTAACCACGAGAGGCTACAGCAACTTCAAGTTACGAAATGTAGAGTATTGCGTGTATTTGTAAGGTGTCCACAGCTTCATACTTTGTCTTTGAAGCGTAGTAACATGGCACATCTGGGGCTTAACTGCCCTCTTCTGCATGAACTGGACATTGGTTCTTGTCACAAGCTCCCTGATACTGCAATCCGTTCTGCTGTGACATCATGCCCCCTGTTAGAGTCCTTGGACATGTCAAACTGTTCATCTGTGAGTGATGAAACACTTCGTGACATAGCTTCAGTTTGTGCAAATTTGCACACTCTTGATGCTTCATATTGTCCCAACATTTCTCTTGAGTCCGTGAGAATGCCGTTGCTAACTATTCTGAAGCTTGAAAGTTGTGAGGGCATAACTTCAGCTTCAATGACTGCGATTGCCTATAGCAATATGTTGCAGGTTTTAGAGCTGGTTAATTGTAGTTTACTGACATCAGTTTCCTTGGACCTTCCTCACCTGAGGAACTTGAGGCTGGTGCATTGTCGCAAATTTGTTGACTTAAATCTACGATGTCTTATGCTGTCAGCTCTGACTGTTTCAAATTGCTCTGCACTTCATCGTATCAGTATCACTTCAAATGCGTTAAAAAAACTGACGTTGCACAAGCAAGAAAGTTTGAACTCTTTGTCATTGCAATGCCAATATCTTGAAGAAGTGGATCTTTCGGATTGCGAGTCTTTGACAAATTCTGTCTGTGAGGTCTTCAGTGATGGAGGTGGATGCCCAATGCTGAAATCATTGGTTCTTGATAACTGTGAGAGCCTTACCGCCATTGAACTCCACAGTACATCCCTTGTCTGCCTTTCATTGGCTGGATGTCGTGCCATCACATCTCTTAATCTCACTTGCCCTTATCTTGATCAAGTTCGCTTAGATGGTTGTGATCATCTGGAAAGAGCATCATTTCTCCCGGTTGGTTTGCAATCACTTAATCTTGGCATTTGCCCAAAACTGAATGCTCTCCTTATTGAAGCCCCTCACATGGATTGTCTTGAGTTGAAGGGGTGTGGTGTACTATCCGAAGCCTCAATTAATTGCCCTCTTTTGAAATCTCTGGACGCGTCCTTCTGCAGCCAACTTCAAGATGATTGCTTGTCTGCGACAACCGTGTCATGTCCTCTTATTGATAAGTTGATTTTGATGTCTTGCCCCGCTATTGGTTTTGATGGGCTGTCCTCGCTGGGTCGGCTTGAAAATCTCACTTATCTTGATTTGTCCTACACTTTCTTGATGGATCTGCAGCCGGTTTTTACATCCTGCTTGCGACTCACGGTACTGAAGCTGCAAGCATGCAAGTATCTGAATGATTCATCACTGGAGGTGCTCTACAAGGAGGGTGCGTTGCCTGCCCTCCGTGAGTTGGATTTGTCTTATGGAACTCTCTGCCAGTCTGCTATTGAGGAGCTGCTCGCCTATTGTACACATTTGACTCATGTGAGTCTGAATGGTTGCATAAATATGCATGACCTTAACTGGGGATTCACAGAGCCATCAAGCTATCAGGCTTCTAGCTTTTCTTCTCAGATTATGGATGAGCCTAGCAGGCTGCCTCATCGCTTACTTCAGATTCTAAACTGTGTTGGTTGTCCAAATATCAAGAAAGTCTACATACCATCTGTAGCGCATTGTATGCATTTGTCCTCCTTAAATGTTTCTCTCTCAGTTAATCTGAAGGAAGTCGACATATCTTGTTCCAATTTGTGTTTCCTAAATTTGAGTAATTGTAGTTCGCTGGAAATCCTGAAGCTGGACTGTCCAAAACTGAGTAGTTTATTTCTCCAGTCATGCAGTATTGAAGAGGAAGCATTGGAATCTGCAATATCAGGATGTAACATGCTGGAAACACTTGATGTGCGCTTCTGCCCAAAGATTTTCTCACTGGGTGGCTTCCGGGCCGTATGTCCTAGCTTGAAGCGCATCTTCAACAGCCTGCGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51940.p1 GENE.S_Transcript_51940~~S_Transcript_51940.p1 ORF type:complete len:822 (+),score=120.18,LRR_4|PF12799.3|1e+04,LRR_4|PF12799.3|3.3e+02,LRR_4|PF12799.3|6.9e+02,LRR_4|PF12799.3|4.5,LRR_4|PF12799.3|5.8,LRR_4|PF12799.3|10,LRR_4|PF12799.3|4.4e+02,LRR_4|PF12799.3|2.4,LRR_4|PF12799.3|8.4e+02,LRR_4|PF12799.3|0.17,LRR_4|PF12799.3|18,LRR_4|PF12799.3|0.92,LRR_4|PF12799.3|4e+02,LRR_4|PF12799.3|32,LRR_4|PF12799.3|12,F-box|PF00646.29|1.8e-08,F-box|PF00646.29|1.5e+03,F-box|PF00646.29|5.9e+03,F-box|PF00646.29|4.7e+03,F-box|PF00646.29|7.3e+02,F-box-like|PF12937.3|3.9e-08,F-box-like|PF12937.3|4e+03,F-box-like|PF12937.3|5.3e+03,F-box-like|PF12937.3|1.4e+04,LRR_8|PF13855.2|1.5e+02,LRR_8|PF13855.2|68,LRR_8|PF13855.2|6.7e+02,LRR_8|PF13855.2|5.6e+02,LRR_8|PF13855.2|0.28,LRR_8|PF13855.2|22,LRR_8|PF13855.2|7.4,LRR_8|PF13855.2|0.031,LRR_8|PF13855.2|24,LRR_8|PF13855.2|1.1e+02,LRR_8|PF13855.2|73 S_Transcript_51940:1134-3599(+)
MERYVNNVIHNNNEDADEECINNSDIDGMEIQMDLSDDLLHMVFSFLGHADLCRAAMVCKQWRTASAHEDFWRYLNFENRNISLAQLEDICHRYPRAIEVNLCGNSNMHMLVVRAVSLLRNLESLTLGKGQIGEAFFHAVSDCALLKTLIVCDAALGNGAQEISINHERLQQLQVTKCRVLRVFVRCPQLHTLSLKRSNMAHLGLNCPLLHELDIGSCHKLPDTAIRSAVTSCPLLESLDMSNCSSVSDETLRDIASVCANLHTLDASYCPNISLESVRMPLLTILKLESCEGITSASMTAIAYSNMLQVLELVNCSLLTSVSLDLPHLRNLRLVHCRKFVDLNLRCLMLSALTVSNCSALHRISITSNALKKLTLHKQESLNSLSLQCQYLEEVDLSDCESLTNSVCEVFSDGGGCPMLKSLVLDNCESLTAIELHSTSLVCLSLAGCRAITSLNLTCPYLDQVRLDGCDHLERASFLPVGLQSLNLGICPKLNALLIEAPHMDCLELKGCGVLSEASINCPLLKSLDASFCSQLQDDCLSATTVSCPLIDKLILMSCPAIGFDGLSSLGRLENLTYLDLSYTFLMDLQPVFTSCLRLTVLKLQACKYLNDSSLEVLYKEGALPALRELDLSYGTLCQSAIEELLAYCTHLTHVSLNGCINMHDLNWGFTEPSSYQASSFSSQIMDEPSRLPHRLLQILNCVGCPNIKKVYIPSVAHCMHLSSLNVSLSVNLKEVDISCSNLCFLNLSNCSSLEILKLDCPKLSSLFLQSCSIEEEALESAISGCNMLETLDVRFCPKIFSLGGFRAVCPSLKRIFNSLR*

Click here to download the sequence:
Link to NCBI Protein BLAST