Transcript Information: S_Transcript_519422.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeHomolog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value5E-09
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.22150345187848
Replicate 30.21104799608892
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_519422.p1 GENE.S_Transcript_519422~~S_Transcript_519422.p1 ORF type:internal len:101 (+),score=16.74,Skp1_POZ|PF03931.11|8.3e-18 S_Transcript_519422:1-300(+)
GATTCGAAGGATGCCAAGGAGGTCAAGGGCGAGGAGGTCAAGGGTCTCGATGCCGAGTCGGAGAACGAATCGCTGACATTGGTGTCCCAAGAGAAGGAGAAGTTCACCGTCCCCAAGAAGGTTGCCCTGCAGTCTGAGTTGGTCAAGACCATGGCGGAAGGAGACAAGGACGAGACAGAGATTCCGCTGCCCAACGTCAAGGGCGCCGTGCTCAGCAAAGTCGTGACGTACTTGAAGTACCACGTCACGGACCAGGCGAAAGAAATCGAGAAGCCGCTGAAGTCTGCGAACATGAACGAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_519422.p1 GENE.S_Transcript_519422~~S_Transcript_519422.p1 ORF type:internal len:101 (+),score=16.74,Skp1_POZ|PF03931.11|8.3e-18 S_Transcript_519422:1-300(+)
DSKDAKEVKGEEVKGLDAESENESLTLVSQEKEKFTVPKKVALQSELVKTMAEGDKDETEIPLPNVKGAVLSKVVTYLKYHVTDQAKEIEKPLKSANMNE

Click here to download the sequence:
Link to NCBI Protein BLAST