Transcript Information: S_Transcript_519519.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value7E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.12554530741721
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_519519.p1 GENE.S_Transcript_519519~~S_Transcript_519519.p1 ORF type:5prime_partial len:174 (-),score=14.51,zf-RVT|PF13966.2|5.8e-16 S_Transcript_519519:144-665(-)
TGGGTACATACATACTATTTCAAAAAACACAGAGTTGAAGCTAATGTTGAGTGTAAAAATGCATGCTGGATGCTACAAAAGGTGAATACCAAGAAGGCTTATAGTAAGCTTCTAGGACAGCAGGAGAAGGTGAATTGGAAATGTCTTATTATAGGCAATAAAGCTAGGCCCCGAGATGTTTTTATATTTTGGCTAGCCCTTTGGGAAAGATTGAGTATAACAGATAGACTGAAAAAACTTGGTATAGACTACCCTCTGCAATGTTCCTTATGCAATGAACAGAATGAAAGTATACAACATGTGTTCTTTCAATGTTCTTGGACTGTGCAGATTTGGCAACAGGTCCAAAGATGGCTGAAAATACCCCTCCATACTGATATCAAGGCTAATATCATCAAGCATAGCAAGAAGAAACACCAGGGGATGATAACTAGATTAATGGCTGCTGAAATTATATATGCCATCTGGATAGAGAGAAATATAGAAAATTCAATGGGCAGCACAAGTCTACTGAAGCTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_519519.p1 GENE.S_Transcript_519519~~S_Transcript_519519.p1 ORF type:5prime_partial len:174 (-),score=14.51,zf-RVT|PF13966.2|5.8e-16 S_Transcript_519519:144-665(-)
WVHTYYFKKHRVEANVECKNACWMLQKVNTKKAYSKLLGQQEKVNWKCLIIGNKARPRDVFIFWLALWERLSITDRLKKLGIDYPLQCSLCNEQNESIQHVFFQCSWTVQIWQQVQRWLKIPLHTDIKANIIKHSKKKHQGMITRLMAAEIIYAIWIERNIENSMGSTSLLKL*

Click here to download the sequence:
Link to NCBI Protein BLAST