Transcript Information: S_Transcript_5196.p1


Annotated TAIR IDAT1G56500.1
Annotated Gene Namehaloacid dehalogenase-like hydrolase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:21159775-21167092 | Forward length=1055
E-Value4.9E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9039081238455
Replicate 210.767846098036
Replicate 39.1269513041709
Condition 2: 8 Hour
Replicate 112.300310455957
Replicate 212.064000290365
Replicate 39.0937916403504
Condition 3: 24 Hour
Replicate 113.494620859377
Replicate 213.227002660599
Replicate 312.051488794253


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5196.p1 GENE.S_Transcript_5196~~S_Transcript_5196.p1 ORF type:3prime_partial len:293 (+),score=68.58,Thioredoxin_8|PF13905.2|4.3e-13,Redoxin|PF08534.6|6e-08,AhpC-TSA|PF00578.17|1.3e-07 S_Transcript_5196:290-1165(+)
ATGCAAGTTGTTATGATCTTGCAGGCAATGCAATATGCATCTCCAAAAGCACTTTGGAATCTTTTATTTGGAGTGAATGGTCCAAGTATTGAACCAAATGAAGGTCAGTCACGGTCTGGCAGGGTTGAACAGCTTGTTAATTACATATCTGACCTAGAAAGCAGGGGAAATGCTCTTACAGTGCCTGAATTCCCATCAAAGCTTGATTGGCTAAACACTGCCCCACTTCAGTTTCGCAGGGATCTGAAAGGAAAAGTGGTTGTGCTGGATTTCTGGACTTACTGCTGCATTAACTGTATGCATGTTCTGCCTGATCTTGAGTTCTTGGAGAAGAAGTACAAGGATATGCCGTTCACTGTCATTGGAGTACATTCTGCTAAATTTGACAATGAGAAAGACTTGGAAGCAATTCGCAACGCAGTCCTAAGATATGGAATTACTCATCCTGTAGTGAATGATGGGGACATGTATTTATGGCGTGAGCTAGGGGTTAATTCATGGCCGACATTTGTCATTGTTGGACCCAATGGTAGGCTTCTAGCACAATCAGCAGGAGAAGGTCGCCGAAAGGACCTTGATGACATTGTGGAGGCAGCTCTTATGTTTTATGGAGAAAGGAAGGTCTTAGATGGTACACCACTTCCTCTGCATCTGGAGAAAGATAATGACCCGCGATTGCTGACCTCTCCATTGAAGTTTCCTGGAAAGCTGGAAGTGGATCTCCTCAACAATAGGCTTTTCATTTCAGACAGCAACCACAACCGTATTGTTGTCACTGATCTGGATGGGAATTATATTACACAAATCGGGAGCTCAGGTGAGGAGGGTTTCCGCGATGGAAGTTTCGAAGATGCAACTTTTAATAGGCCTCAGGGC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5196.p1 GENE.S_Transcript_5196~~S_Transcript_5196.p1 ORF type:3prime_partial len:293 (+),score=68.58,Thioredoxin_8|PF13905.2|4.3e-13,Redoxin|PF08534.6|6e-08,AhpC-TSA|PF00578.17|1.3e-07 S_Transcript_5196:290-1165(+)
MQVVMILQAMQYASPKALWNLLFGVNGPSIEPNEGQSRSGRVEQLVNYISDLESRGNALTVPEFPSKLDWLNTAPLQFRRDLKGKVVVLDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVIGVHSAKFDNEKDLEAIRNAVLRYGITHPVVNDGDMYLWRELGVNSWPTFVIVGPNGRLLAQSAGEGRRKDLDDIVEAALMFYGERKVLDGTPLPLHLEKDNDPRLLTSPLKFPGKLEVDLLNNRLFISDSNHNRIVVTDLDGNYITQIGSSGEEGFRDGSFEDATFNRPQG

Click here to download the sequence:
Link to NCBI Protein BLAST