Transcript Information: S_Transcript_519635.p1


Annotated TAIR IDAT5G48460.1
Annotated Gene NameActin binding Calponin Homology (CH) domain-containing protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:19636225-19639365 | Reverse length=654
E-Value7E-16
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.47962585994597
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_519635.p1 GENE.S_Transcript_519635~~S_Transcript_519635.p1 ORF type:internal len:92 (+),score=24.71,CH|PF00307.27|3.3e-06,CH|PF00307.27|1.3e+02 S_Transcript_519635:2-274(+)
GAAAAGCCAAAGATGAAGCTCCATAAGGTTCAAAATACCAACTACGTCATTGAATTGGCTGAAAAGATGGGCATCAAATGTGTTAACATGTCAGGTGTTGACATTCACGATGCAAACAAGAAGATTATCTTGGCTCTTCTCTGGCAATTGATGAGACAAAACCTTCTTAACTTGTTGAAGGAAGTTGGTGGAGGAAACAAAATCAGTGATGATGATGTCCTTGCATGGGCTAATGGTAAATTAGCAGGTGCTCACAAGATTGACAGTTTCAAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_519635.p1 GENE.S_Transcript_519635~~S_Transcript_519635.p1 ORF type:internal len:92 (+),score=24.71,CH|PF00307.27|3.3e-06,CH|PF00307.27|1.3e+02 S_Transcript_519635:2-274(+)
EKPKMKLHKVQNTNYVIELAEKMGIKCVNMSGVDIHDANKKIILALLWQLMRQNLLNLLKEVGGGNKISDDDVLAWANGKLAGAHKIDSFK

Click here to download the sequence:
Link to NCBI Protein BLAST