Transcript Information: S_Transcript_51999.p1


Annotated TAIR IDAT2G21390.1
Annotated Gene NameCoatomer, alpha subunit
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9152428-9156577 | Forward length=1218
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 119.352922015723
Replicate 218.708955483447
Replicate 316.305985230858
Condition 2: 8 Hour
Replicate 119.730804845597
Replicate 217.721004181345
Replicate 318.968827408541
Condition 3: 24 Hour
Replicate 115.293213421517
Replicate 216.555569836789
Replicate 316.144595391607


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_51999.p1 GENE.S_Transcript_51999~~S_Transcript_51999.p1 ORF type:complete len:1217 (+),score=289.52,COPI_C|PF06957.7|5.2e-164,Coatomer_WDAD|PF04053.10|5.4e-130,WD40|PF00400.28|84,WD40|PF00400.28|0.0068,WD40|PF00400.28|6e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0047,WD40|PF00400.28|0.00038,WD40|PF00400.28|2.4e+03 S_Transcript_51999:170-3820(+)
ATGTTGACGAAATTCGAGACAAAGAGCAATAGAGTGAAAGGGCTGAGCTTTCACCCGAAGAGACCGTGGATCTTAGCGAGTTTACACAGCGGTGTCATCCAATTATGGGACTATCGTATGGGCACTCTCATCGATCGCTTCGATGAGCATGATGGCCCCGTTCGTGGCGTCGATTTCCATATTACTCAGCCTCTCTTCGTCTCTGGGGGGGACGATTACAAGATCAAAGTATGGAACTACAAACTGCATAGATGCCTTTTTACTCTTCTAGGACACCTTGATTATATCCGGACTGTCCAATTTCACCACGAATATCCTTGGATTGTCAGTGCTAGTGATGACCAGACCATAAGGATATGGAACTGGCAATCACGTACTTGTATCTCTGTGTTAACTGGACACAATCATTATGTCATGTGTGCCTCCTTTCATCCCAAGGAGGATTTGGTTGTTTCTGCATCATTGGACCAGACAGTTCGTGTTTGGGATATTGGTGCCTTGAGGAAGAAAACTGTTTCTCCTGCAGATGACCTCCTGCGGTTGAGTCAGATGAATACAGATCTATTTGGTGGTGTTGATGCTGTTGTTAAGTATGTCTTGGAGGGTCATGATCGGGGAGTCAACTGGGCCTCTTTCCATCCAACCCTTCCTTTGATTGTGTCTGGAGCTGATGATCGCCAGGTGAAAATTTGGCGTATGAATGATACAAAAGCCTGGGAAGTGGACACCTTGAGAGGGCACATGAACAATGTTTCTTGTGTTCTCTTTCATGCTAGGCAGGATATCATTGTGTCTAACTCAGAGGACAAAAGTATTCGTGTGTGGGATGCCACAAAGCGGACTGGGCTGCAGACTTTCAGGAGGGAACATGACCGCTTCTGGATTCTTACAGCCCATCCTGAGATGAATCTTCTGGCTGCTGGTCACGATAGTGGAATGATTGTCTTTAAGTTGGAAAGAGAACGCCCTGCTTTTTCAGTTAGTGGCGATCTTGTGTACTATGTAAAAGATCGCTTTCTACGTGTTTATGAGTACTCGACTCAAAAGGATACTCAAGTCATCCCCATAAGAAGACCTGGTGCCAGCATCCTCAATCAAAGCCCAAGAACTCTTTCTTACAGCCCTACAGAAAATGCTATTTTGATTGCTTCAGATATAGATGGTGGGTCATATGAACTATATGTAGTGCCAAAAGATGGTTGGGGCAGGGGTGATATGCTACAAGATGCAAAGAGAGGCCTTGGTGGTTCAGCTGTTTTTATCGCTCGTAACAGATTTGCTGTATTGGAGCGTAGCAGCAACCAAGTCTTAGTGAAAAATCTTAAAAATGAGATTGTGAAAAAGGTGGCCCTTCCTGTTCTAACTGATGCCGTATTTTATGCCGGAACAGGAAATCTTCTCTGCAGAGCAGAGGATAGAGTGGCTGTATTTGATCTTCAGCAGAGAATGGTTCTTGGAGAACTCCAAACTTCTTTTGTCAGATACGTGGTCTGGTCAAATGATATGGATAGTGTTGCTCTGTTGAGCAAACATTCCATTATCATAGCCACAAAGAAGCTCGAGCACCGGTGCACTCTTCATGAAACCATCCGTGTGAAGAGTGGAGCCTGGGACGACAATGGTGTTTTCATCTATACAACTCTGAATCACATGAAATATTGTCTTCCTAATGGGGACAGTGGGATTATTAGGACTCTTGATGTCCCATTGTACATCACAAAGGTGGCTGGGAACACCATATTTTGCTTAGATCGGGATGGGAAGAATCGGGTTATATCTATAGATGCTACTGAATACATGTTCAAGCTCTTCCTCCTCAGAAAGAGATTTGACCAGGTCATGAACATGATTAGGCGCTCAGAGCTTTGTGGGCAGGCCATGATTGCCTATCTTCAGCAAAAAGGTTTTCCAGATGTTGCTCTTCACTTTGTGAAAGATGAGAAGACTCGCTTTAACTTGGCTTTGGAGAGTGGTAATATTGAAGTAGCTGTTGCTTCTGCCAATGTAATTGATGACAAAAACCACTGGTATAGGTTGGGGGTGGAGGCCCTTCGTCAAGGCAATGCAGACATTGTGGAGTATGCATATCAGAAGACCAAGAACTTTGAGAGGTTGTCATTCCTTTATCTCATAACTGGAAATATGGAGAAATTGTATAAGATGCTGAAAATCGCCGAAGTTAAGAATAATGTCATGGGTCAGTTTCACAATGCTCTTTACCTGGGTGATATCCAGGAACGTGTTAAGATTCTGAGAGCCGCAGGTCATTTGCCTCTTGCTTACGTCACTGCTAAAGTCCATGGGCTTCAGGATGTTGCTGCGGAGCTAGCTGCTGAGCTGGGGGATGACATTCCTGAATTGCCTAAAGGAAAATCATCGTCCCTCTTTATGCCTCCAAATCCTATAATATGTGGTGCGAATTGGCCATTGCTGACAGTCATGAAGGGGATATTTGATGATGGTCTTGATTATGCTAGGGATGCACAGGATGAGGAGGAAGAAGTTGAGGATGCTGACTGGGGTGAGGCCTTGGATATTGTTGATGTGGACATGCCAAATGGAGATATCACTGCTGTTTTGGATGAAGAGGAAGGACCACTTGAAGATGGTGAGGAAGGAGGGTGGGATCTTGAGGATCTTGACCTTCCTCCGGAGGTTGAAACACCCAAGGTTTCCAGCAATGGGCGTTCTTCTGTATTCGTTGCACCTACCCCTGGAATGGCTGTGAGTCAAATATGGATCCAGAGATCGTCCCTTGCTGCTGAACATGTTGCAGCTGGCAACTTTGACACTGCCATGCGCTTGCTTAACCGACAGTTGGGTATAAGAAACTTTGCCCCTTTGAAGCAATTGTTTGTTGATCTACACTCTGGAAGCCACTCTTACCTGGCCGCCTTTGCTTCTGCACCTGTGCTTTCTGTGGCAATTGAGAGGGGATGGCATGAGTCAGCCAGCCCTAATGTGAGGGGTCCAGCGGCTCTTGTTTTCGGCTTTTCTCAGTTGGAGGAAAAGCTTAGGGCTGGTTACAAATTAACCACTGCTGGAAAATTGAGTGAGGCTCTTCGGACTTTCGTCAGTATACTTAATACCATTCCATTGATAGTCGTTGAATCAAGGAGAGAGGTTGATGAAGTCAAGGAATTGATCATCATAGTGAAGGAGTATGTTTTGGGTTTGAAGATGGAGTTGAAGAGAAGGGAGCTAAAAGACAATCCTGTTCGCCAGCAGGAATTGGCTGCATATTTCACTCACTGTAACCTTCAGCTGCCTCATGTGAGGCTTGCATTGTTAACTGCAACGACTAATTGCTACAAGGCTGGTAACCTGAGTACAGCTGCTAACTTCGCCCGGCGTCTCTTGGAGACCAATCCCACCGTTGAGAACCAAGCCAAGACTGCTCGGCAGGTACTCCAGGCTGCTGAGAGGAACATGAAAGATTCAACCCAACTCAACTATGATTTCAGGAATCCATTTGTGGTTTGTGGGGCAACTTACGTGCCTATATACCGGGGTCAGGAGGATGTATCATGTCCTTACTGTAGTTCACGCTTTGTTCCAGCCCAGGAAGGTCAAATTTGTGCTGTTTGTGATCTTGCAGTCATTGGAGCTGATGCATCTGGACTGCTTTGTTCCCCTTCACAGATAAGGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_51999.p1 GENE.S_Transcript_51999~~S_Transcript_51999.p1 ORF type:complete len:1217 (+),score=289.52,COPI_C|PF06957.7|5.2e-164,Coatomer_WDAD|PF04053.10|5.4e-130,WD40|PF00400.28|84,WD40|PF00400.28|0.0068,WD40|PF00400.28|6e-06,WD40|PF00400.28|5.6e-06,WD40|PF00400.28|0.0047,WD40|PF00400.28|0.00038,WD40|PF00400.28|2.4e+03 S_Transcript_51999:170-3820(+)
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHITQPLFVSGGDDYKIKVWNYKLHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALRKKTVSPADDLLRLSQMNTDLFGGVDAVVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKIWRMNDTKAWEVDTLRGHMNNVSCVLFHARQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILTAHPEMNLLAAGHDSGMIVFKLERERPAFSVSGDLVYYVKDRFLRVYEYSTQKDTQVIPIRRPGASILNQSPRTLSYSPTENAILIASDIDGGSYELYVVPKDGWGRGDMLQDAKRGLGGSAVFIARNRFAVLERSSNQVLVKNLKNEIVKKVALPVLTDAVFYAGTGNLLCRAEDRVAVFDLQQRMVLGELQTSFVRYVVWSNDMDSVALLSKHSIIIATKKLEHRCTLHETIRVKSGAWDDNGVFIYTTLNHMKYCLPNGDSGIIRTLDVPLYITKVAGNTIFCLDRDGKNRVISIDATEYMFKLFLLRKRFDQVMNMIRRSELCGQAMIAYLQQKGFPDVALHFVKDEKTRFNLALESGNIEVAVASANVIDDKNHWYRLGVEALRQGNADIVEYAYQKTKNFERLSFLYLITGNMEKLYKMLKIAEVKNNVMGQFHNALYLGDIQERVKILRAAGHLPLAYVTAKVHGLQDVAAELAAELGDDIPELPKGKSSSLFMPPNPIICGANWPLLTVMKGIFDDGLDYARDAQDEEEEVEDADWGEALDIVDVDMPNGDITAVLDEEEGPLEDGEEGGWDLEDLDLPPEVETPKVSSNGRSSVFVAPTPGMAVSQIWIQRSSLAAEHVAAGNFDTAMRLLNRQLGIRNFAPLKQLFVDLHSGSHSYLAAFASAPVLSVAIERGWHESASPNVRGPAALVFGFSQLEEKLRAGYKLTTAGKLSEALRTFVSILNTIPLIVVESRREVDEVKELIIIVKEYVLGLKMELKRRELKDNPVRQQELAAYFTHCNLQLPHVRLALLTATTNCYKAGNLSTAANFARRLLETNPTVENQAKTARQVLQAAERNMKDSTQLNYDFRNPFVVCGATYVPIYRGQEDVSCPYCSSRFVPAQEGQICAVCDLAVIGADASGLLCSPSQIR*

Click here to download the sequence:
Link to NCBI Protein BLAST