Transcript Information: S_Transcript_5200.p1


Annotated TAIR IDAT3G05950.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:1781130-1781964 | Reverse length=229
E-Value5E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.4605484634188
Replicate 26.8311565993979
Replicate 37.6394597166379
Condition 2: 8 Hour
Replicate 116.417873716956
Replicate 218.159575883293
Replicate 321.940161133161
Condition 3: 24 Hour
Replicate 110.693938779914
Replicate 213.939666534406
Replicate 39.8144356890201


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5200.p1 GENE.S_Transcript_5200~~S_Transcript_5200.p1 ORF type:complete len:239 (+),score=20.66,Cupin_1|PF00190.18|1.3e+03,Cupin_1|PF00190.18|3.3e-40,Cupin_2|PF07883.7|8.7e-07 S_Transcript_5200:387-1103(+)
ATGGCCAAGTGTAGAGGTTCTTGTTGCAGGATGTTGGCCATAGTCTTAGCTATGTGGATCATGTTTCACACATCCTATGCTTCTGATCCTAGTCCCCTTCAAGATTTCTGTATTGGTGTGAGTGATCATCATCACCATGCTGTATTTGTTAACGGTATGTATTGCAAGAATCCAAAGGATGTTACATCAAATGATTTCTTGTACAAAGGCTACAATACAGTCGGAGACACAAACAACCCCTTAGGATCCAAGGTTGTGCAAGTAAATGTCACCACATTCCCCACTCTTAACACACTAGGAGTGGCAATGGGCCGTGTAGACTTTGCACCCGGTGGCCTGAACTCTCCACACTTCCACCCTCGAGCCTCGGAGATGTTAACGGTAATAGAGGGTACCTTATATGCAGGCTTTGTGACCTCAAATTTACTAAATGGTGCTAATAAGCTATACTCCAAAGTGCTAAACAAGGGGGACATATTTGTCTTTCCACAAGGACTCATCCACTTTCAACTCAATCTTCGTGATGACGCACCAGCCGTGGCAAATGTTGCCTTTGGTAGCCAACAACCAGGCTTGGTTAATGTTGCTAGTGCTTTATTTAGCTCACAAATTTCAGATGATGTTCTTACCAAAGCCTTCCAAGTGAATGAGAAAATGGTCGAATCTCTTCGAGCTCAATATTTGTCTGAAAATCAATCAAGGCATTTCGACCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5200.p1 GENE.S_Transcript_5200~~S_Transcript_5200.p1 ORF type:complete len:239 (+),score=20.66,Cupin_1|PF00190.18|1.3e+03,Cupin_1|PF00190.18|3.3e-40,Cupin_2|PF07883.7|8.7e-07 S_Transcript_5200:387-1103(+)
MAKCRGSCCRMLAIVLAMWIMFHTSYASDPSPLQDFCIGVSDHHHHAVFVNGMYCKNPKDVTSNDFLYKGYNTVGDTNNPLGSKVVQVNVTTFPTLNTLGVAMGRVDFAPGGLNSPHFHPRASEMLTVIEGTLYAGFVTSNLLNGANKLYSKVLNKGDIFVFPQGLIHFQLNLRDDAPAVANVAFGSQQPGLVNVASALFSSQISDDVLTKAFQVNEKMVESLRAQYLSENQSRHFDL*

Click here to download the sequence:
Link to NCBI Protein BLAST