Transcript Information: S_Transcript_5201.p1


Annotated TAIR IDAT5G39110.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15657802-15658584 | Reverse length=222
E-Value7E-55
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 150.970663382634
Replicate 256.278810650949
Replicate 340.402095572972
Condition 2: 8 Hour
Replicate 197.500407424519
Replicate 296.312704313399
Replicate 3128.79829951146
Condition 3: 24 Hour
Replicate 133.137577498444
Replicate 269.527964327439
Replicate 364.658207055488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5201.p1 GENE.S_Transcript_5201~~S_Transcript_5201.p1 ORF type:complete len:236 (+),score=21.72,Cupin_1|PF00190.18|1.4e-38,Cupin_2|PF07883.7|1.4e-05 S_Transcript_5201:381-1088(+)
ATGAGAAAGTGTAGAGGTTCTCGTTGCAGGATGTTGGCCATAGTCTTAGCTATGGGGTTCATATTTCACACATCCTGTGCTTCTGATCCTGGTCCCCTACAGGATTTTTGTATTGGTGTTAGTGATCCTCACAATGCAGTATTTGTTAACGGTATGTATTGCAAGAATCCAAAGGATGTTACATCAAATGATTTCTTGTACAAAGGCTACAATACAGTCGGAGACACAAACAACCCCTTAGGATCCAAGGTTGTGCAAGTAAATGTCACCACATTCCCTGCTCTTAACACACTAGGGGTGGCAATGGGCCGTGTAGACTTTGCACCCAGCGGCCTGAACTCTCCACATTTCCACCCTCGGGCCTCGGAGATGTTAACGGTCATAGAGGGTACCTTATATGCAGGGTTTGTGACCTCAAATTTACTAAATGGTGCTAATAAGCTATACTCCAAAGTGCTAAACAAGGGGGACATATTTGTCTTTCCACAAGGACTCATCCACTTTCAACTCAATCTTCGTGATGACGCAGCAGCCGTGGCTAATGTTGCCTTTGGTAGCCAACAACCAGGCTTGGTTAATGTTGCTAGTGCTTTATTTAGCTCACAAATTTCAGATGATGTTCTTACCAAAGCCTTCCAAGTGAATGAGAAAATGGTCGAATCTCTTCGAGCTCAATATTTTTCTCAATCAAGGCATTTCAACCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5201.p1 GENE.S_Transcript_5201~~S_Transcript_5201.p1 ORF type:complete len:236 (+),score=21.72,Cupin_1|PF00190.18|1.4e-38,Cupin_2|PF07883.7|1.4e-05 S_Transcript_5201:381-1088(+)
MRKCRGSRCRMLAIVLAMGFIFHTSCASDPGPLQDFCIGVSDPHNAVFVNGMYCKNPKDVTSNDFLYKGYNTVGDTNNPLGSKVVQVNVTTFPALNTLGVAMGRVDFAPSGLNSPHFHPRASEMLTVIEGTLYAGFVTSNLLNGANKLYSKVLNKGDIFVFPQGLIHFQLNLRDDAAAVANVAFGSQQPGLVNVASALFSSQISDDVLTKAFQVNEKMVESLRAQYFSQSRHFNL*

Click here to download the sequence:
Link to NCBI Protein BLAST