Transcript Information: S_Transcript_52015.p1


Annotated TAIR IDAT5G54150.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54148.1); Has 103 Blast hits to 99 proteins in 23 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:21977461-21978237 | Reverse length=160
E-Value4.3E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.71927030365353
Replicate 22.0273914728527
Replicate 31.0965951184844
Condition 2: 8 Hour
Replicate 10.92217904074089
Replicate 20.60464455783045
Replicate 31.1522079786476
Condition 3: 24 Hour
Replicate 11.7712067695076
Replicate 22.6951559712413
Replicate 32.1813660026046


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52015.p1 GENE.S_Transcript_52015~~S_Transcript_52015.p1 ORF type:3prime_partial len:185 (+),score=46.31 S_Transcript_52015:360-911(+)
ATGGATCAATCCCTAATTCTGGACATTAGCTCGGATGATGACGTGGGATTCGACGATTCCTCAACTGCCGACAACTTCGATTGGATTTCCAAGCTTCTCCATGACGACGACAACGACCTCCCCAATCAAGATTCTAATAGTCATCTCAATTCCCACAGCAACAGTGGTGTTACTAACAGTAATAACAGTGGGTTGGTCAATAATCATGATGGTAAATTGGATGATGATGATGACGTCGTCGTTGTGGTGGGGGAGACAATTGTCAACCCTAAAAGGCTCAAGAAGGTTTCTGCGACTAGATGTAGGGATTTAGATGATGATGATGATTGTGTGGTTTTGGAGGGTGACCCTGATAAGGTAAATAACAAGTCGTCTGAGAAAAAAGACGAGGGTTTTAAGGGTTCTCAAGATGATGCTATTGTTGATGATGATGATGAGGATTTGCTTATTGTTAGTGAAAAGGGTCAGGTTGCCTGCAGGGATTATCCTCATTCACGACATCTTTGTGCCAAATTTCCGTTCAGTACTACAACACATGATAGTCGCTGTGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52015.p1 GENE.S_Transcript_52015~~S_Transcript_52015.p1 ORF type:3prime_partial len:185 (+),score=46.31 S_Transcript_52015:360-911(+)
MDQSLILDISSDDDVGFDDSSTADNFDWISKLLHDDDNDLPNQDSNSHLNSHSNSGVTNSNNSGLVNNHDGKLDDDDDVVVVVGETIVNPKRLKKVSATRCRDLDDDDDCVVLEGDPDKVNNKSSEKKDEGFKGSQDDAIVDDDDEDLLIVSEKGQVACRDYPHSRHLCAKFPFSTTTHDSRCD

Click here to download the sequence:
Link to NCBI Protein BLAST