Transcript Information: S_Transcript_520252.p1


Annotated TAIR IDAT1G62040.2
Annotated Gene NameUbiquitin-like superfamily protein
Annotated Gene Symbol(s)ATG8C
Annotation TypeOrtholog
Chromosome Positionchr1:22932782-22934253 | Forward length=133
E-Value1.3E-41
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.19211183420417
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30.22204007921856
Condition 3: 24 Hour
Replicate 10
Replicate 20.4721627411739
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_520252.p1 GENE.S_Transcript_520252~~S_Transcript_520252.p1 ORF type:3prime_partial len:96 (+),score=7.70,Atg8|PF02991.12|1.9e-31 S_Transcript_520252:45-329(+)
ATGTCCGGGAGCAGCGAGGCGACGGACAGGCCATTCAAAGAGGCGCATCCTTTGGCCAAGCGCAAGGCAGAGGCGCAACGCATCCGCGAGAAGTTCTCAGACAGGATTCCGGTGATCGTGGAGAAGGCGCTCAGAAGTGACATTCCGGACATTGACAAGAAGAAGTACCTGGTGCCAGCGGACCTGAGTGTCGGGCAATTTGTTTATGTCATCCGGAAGCGTATTGCATTGCCCGCTGATAAAGCAATTTTCATTTTCGTACGCAACACGCTTCCGCCCATTGCT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_520252.p1 GENE.S_Transcript_520252~~S_Transcript_520252.p1 ORF type:3prime_partial len:96 (+),score=7.70,Atg8|PF02991.12|1.9e-31 S_Transcript_520252:45-329(+)
MSGSSEATDRPFKEAHPLAKRKAEAQRIREKFSDRIPVIVEKALRSDIPDIDKKKYLVPADLSVGQFVYVIRKRIALPADKAIFIFVRNTLPPIA

Click here to download the sequence:
Link to NCBI Protein BLAST