Transcript Information: S_Transcript_52047.p1


Annotated TAIR IDAT5G56290.1
Annotated Gene Nameperoxin 5
Annotated Gene Symbol(s)PEX5, ATPEX5
Annotation TypeOrtholog
Chromosome Positionchr5:22786655-22791972 | Forward length=728
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 162.560147481897
Replicate 271.179816376989
Replicate 372.536490781283
Condition 2: 8 Hour
Replicate 180.505489550623
Replicate 277.807312939772
Replicate 364.632389324341
Condition 3: 24 Hour
Replicate 192.292439486366
Replicate 275.030262420759
Replicate 376.13883552013


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52047.p1 GENE.S_Transcript_52047~~S_Transcript_52047.p1 ORF type:complete len:747 (+),score=190.35,TPR_1|PF00515.24|2.7e+03,TPR_1|PF00515.24|2.5,TPR_1|PF00515.24|2.4e-06,TPR_1|PF00515.24|0.0016,TPR_1|PF00515.24|2e-08,TPR_11|PF13414.2|0.00012,TPR_11|PF13414.2|0.0023,TPR_11|PF13414.2|3.8e-05,TPR_11|PF13414.2|7.6e-11,TPR_2|PF07719.13|3.8e+02,TPR_2|PF07719.13|0.0066,TPR_2|PF07719.13|8e+03,TPR_2|PF07719.13|0.0026,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|7.6e-07,TPR_8|PF13181.2|2.9e+03,TPR_8|PF13181.2|0.036,TPR_8|PF13181.2|0.00058,TPR_8|PF13181.2|0.4,TPR_8|PF13181.2|0.00019,TPR_17|PF13431.2|0.023,TPR_17|PF13431.2|35,TPR_17|PF13431.2|0.59,TPR_17|PF13431.2|0.42,TPR_17|PF13431.2|0.00016,TPR_17|PF13431.2|6.4e+02,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|3.1e+03,TPR_16|PF13432.2|0.0026,TPR_16|PF13432.2|8.3e-06,TPR_16|PF13432.2|0.0002,TPR_16|PF13432.2|1.2,TPR_14|PF13428.2|7.6,TPR_14|PF13428.2|0.51,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|61,TPR_14|PF13428.2|0.5,TPR_14|PF13428.2|0.14,TPR_14|PF13428.2|0.0012,TPR_12|PF13424.2|25,TPR_12|PF13424.2|0.23,TPR_12|PF13424.2|0.0013,TPR_12|PF13424.2|2.2e-06,TPR_12|PF13424.2|0.00038,TPR_19|PF14559.2|0.32,TPR_19|PF14559.2|9e-05,TPR_19|PF14559.2|0.0011,TPR_7|PF13176.2|2e+03,TPR_7|PF13176.2|5.9e+03,TPR_7|PF13176.2|0.23,TPR_7|PF13176.2|51,TPR_7|PF13176.2|0.0063,TPR_9|PF13371.2|0.82,TPR_9|PF13371.2|64,TPR_9|PF13371.2|0.69,TPR_9|PF13371.2|0.15 S_Transcript_52047:737-2977(+)
ATGGCGATGCGGGATTTAGTTACTGGAGCACCATCTTGTGCTCCTGGCTCATCCTCGAATCCACTTGGCGCTTTTGCCAACGTCCTTCTCGGCTCTTCCTCTAAAACTCAGGAAAGGCTGAAGGAGATTCCTACATCAAGTTCCTCAGCCTCTGGCAATCACTTCCACTCAAGTGCTGATGGGCAGTTGACAAATCTTCCTGGCTCAGAGTCAGATTATCCACTAAATCAGCATTCTGATAGTCAGGACGCAGCTTTTCTGCACAGTTTTCGTGCTGCTGGTCGTGGTGGCCTTGCTGAAGCTTGGGATGAAATAAACAATCACCCTGAGAGGTTATCAAGCTTCCCTGAGTCAGGCCACTTTCATAATCAAGGAATTGCTGCTCAAACTCAACCTTCTTGGGATGGACCACCACAAAAAATATTGTCAGGTTTTCTACATTCCTTTGTTGACAGTAGCCGTGGTGGTGTACCTTTCCGGCCAACAGCACTTCCGGTATTAGGATTAACTAAAGGTGACAAACAATGTATCCGTGACCGTAGCAGCATTATGGCTCGGCATTTTTTTGCAGACAAGAGTGAAGACTTCATTAATGCACAGGTGGATGCATTACTATGCTCTCTAGATATTGACAAAGATATTCAGATGAAGCGGCCTTTGCCTGGTATGGTTGGGGAACTGGAGGAGTACTGGAATGAGGCTCAAGGTTCACTTGTTCCTGTTGCTCCTATTGCTGATGGTTGGGTTGCTGAGTATGGGCAGCATACAGCAAATCATCGTGAACCTAATAGTTGGGTTAATTCATTTGAGCAAGAATATGGTTCTAGTGGTTGGGCCTCTGAGTTTGAGCATGAGCAGGCACAGATGGCATCTCTAAATCAAATGTCAGGTCCTCATATGTCAAGTTTAGCTGCAATGGAGCAAACTCGTATGCTTGCACATACAATGGCCCAAAATAATGACCCTAAGTTTCAGAATTCGAAGTTCCTCCAATTTGTCTCAAAGATGAGTCGTGGTGAACTTTTTGTTGAAGATAATCAAGTGAAGGCAAGTGCAGCATCTGCAGCTGAGAACTGGACTGCAGAATTTCAAAAACAGCATGATGGAGGCTTCTCCTGGGCTGACCAGTTTAGTCATGAAGAGTTCTCTCGTGGAGGCGAAAAGTGGGTTTCAGAATTTACTAGTGGAAGCAAACAAGAGGTGTTGGCTGATGACAAGTGGGTTGATGAATTCTCCAAACTAAATGTTCAAGATTGGGTAGATGAATTTGGGCATCAAGCTGAAGCTGCAACTGGGGAGGATTCTGTAGATGGCTGGGCCAATGCATATGATGAGTACGTCAGTGAGCAATCAATTCTGAAGGATAAATCAGACTCCTCAAAGGGTGTCTATGTCTTCTCAGACATGAATCCTTATGTAGGTCACCCTGATCCCTTAAAAGAAGGCCAGGAGCTCTTTAAAAAGGGGCTTCTGAGTGAGGCAGTGCTTGCTTTAGAGGCTGAAGTCTTGAAGAATCCGGATAATGCAGAAGGTTGGAGATTATTAGGAATAGCTCATGCAGAGAATGATGATGATCAACAGGCTATTTCATCGATGATGAAGGCTCAAGAAGTTGATCCAACAAATCTAGAAGTTTTACTTGCTCTAGGAGTGAGTCATACAAATGAGTTGGAGCAGACAGCGGCGCTGAAATATTTGTACCAATGGCTCCATAACCACCCAAAATACGGGGCACTTTCCTCCTCAGAGCAATCGGGGTCTCTCTATTATGCTGATGTGGCAAGGGTATTTAGTGAGGCTGCTCAGATGTCGCCTGAGGATGCTGATGTCCATATTGTTTTGGGAGTATTATACAACCTATCTAGGGAATATGACAAGGCGATTGAATCGTTTAAGACGGCCATAAAACTGAAACCACAGGATTATTCACTTTGGAACAAGCTTGGTGCAACACAAGCTAATAGTGTGCAGAGTGCAGATGCGATAGCAGCTTATCAACAGGCCCTAGATCTGAAGCCAAATTATGTACGTGCTTGGGCAAATATGGGTATCAGCTATGCCAACCAGGGCATGTATGAGGAGTCCATCCGCTACTATGTTAGGGCACTCTCGATGAATCCGAAAGCAGACAACGCGTGGCAGTATTTGAGGATTTCTCTCAGCTGTGCTTCAAGGAATGACATGCTGGAAGCTTGTGATGCTCGGAACCTTGATGTTCTCCAAAAAGAGTTTCAACTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52047.p1 GENE.S_Transcript_52047~~S_Transcript_52047.p1 ORF type:complete len:747 (+),score=190.35,TPR_1|PF00515.24|2.7e+03,TPR_1|PF00515.24|2.5,TPR_1|PF00515.24|2.4e-06,TPR_1|PF00515.24|0.0016,TPR_1|PF00515.24|2e-08,TPR_11|PF13414.2|0.00012,TPR_11|PF13414.2|0.0023,TPR_11|PF13414.2|3.8e-05,TPR_11|PF13414.2|7.6e-11,TPR_2|PF07719.13|3.8e+02,TPR_2|PF07719.13|0.0066,TPR_2|PF07719.13|8e+03,TPR_2|PF07719.13|0.0026,TPR_2|PF07719.13|0.14,TPR_2|PF07719.13|7.6e-07,TPR_8|PF13181.2|2.9e+03,TPR_8|PF13181.2|0.036,TPR_8|PF13181.2|0.00058,TPR_8|PF13181.2|0.4,TPR_8|PF13181.2|0.00019,TPR_17|PF13431.2|0.023,TPR_17|PF13431.2|35,TPR_17|PF13431.2|0.59,TPR_17|PF13431.2|0.42,TPR_17|PF13431.2|0.00016,TPR_17|PF13431.2|6.4e+02,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|3.1e+03,TPR_16|PF13432.2|0.0026,TPR_16|PF13432.2|8.3e-06,TPR_16|PF13432.2|0.0002,TPR_16|PF13432.2|1.2,TPR_14|PF13428.2|7.6,TPR_14|PF13428.2|0.51,TPR_14|PF13428.2|1.1e+04,TPR_14|PF13428.2|61,TPR_14|PF13428.2|0.5,TPR_14|PF13428.2|0.14,TPR_14|PF13428.2|0.0012,TPR_12|PF13424.2|25,TPR_12|PF13424.2|0.23,TPR_12|PF13424.2|0.0013,TPR_12|PF13424.2|2.2e-06,TPR_12|PF13424.2|0.00038,TPR_19|PF14559.2|0.32,TPR_19|PF14559.2|9e-05,TPR_19|PF14559.2|0.0011,TPR_7|PF13176.2|2e+03,TPR_7|PF13176.2|5.9e+03,TPR_7|PF13176.2|0.23,TPR_7|PF13176.2|51,TPR_7|PF13176.2|0.0063,TPR_9|PF13371.2|0.82,TPR_9|PF13371.2|64,TPR_9|PF13371.2|0.69,TPR_9|PF13371.2|0.15 S_Transcript_52047:737-2977(+)
MAMRDLVTGAPSCAPGSSSNPLGAFANVLLGSSSKTQERLKEIPTSSSSASGNHFHSSADGQLTNLPGSESDYPLNQHSDSQDAAFLHSFRAAGRGGLAEAWDEINNHPERLSSFPESGHFHNQGIAAQTQPSWDGPPQKILSGFLHSFVDSSRGGVPFRPTALPVLGLTKGDKQCIRDRSSIMARHFFADKSEDFINAQVDALLCSLDIDKDIQMKRPLPGMVGELEEYWNEAQGSLVPVAPIADGWVAEYGQHTANHREPNSWVNSFEQEYGSSGWASEFEHEQAQMASLNQMSGPHMSSLAAMEQTRMLAHTMAQNNDPKFQNSKFLQFVSKMSRGELFVEDNQVKASAASAAENWTAEFQKQHDGGFSWADQFSHEEFSRGGEKWVSEFTSGSKQEVLADDKWVDEFSKLNVQDWVDEFGHQAEAATGEDSVDGWANAYDEYVSEQSILKDKSDSSKGVYVFSDMNPYVGHPDPLKEGQELFKKGLLSEAVLALEAEVLKNPDNAEGWRLLGIAHAENDDDQQAISSMMKAQEVDPTNLEVLLALGVSHTNELEQTAALKYLYQWLHNHPKYGALSSSEQSGSLYYADVARVFSEAAQMSPEDADVHIVLGVLYNLSREYDKAIESFKTAIKLKPQDYSLWNKLGATQANSVQSADAIAAYQQALDLKPNYVRAWANMGISYANQGMYEESIRYYVRALSMNPKADNAWQYLRISLSCASRNDMLEACDARNLDVLQKEFQL*

Click here to download the sequence:
Link to NCBI Protein BLAST