Transcript Information: S_Transcript_52054.p1


Annotated TAIR IDAT5G17510.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03460.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:5770518-5772343 | Reverse length=369
E-Value4.1E-142
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.5405620009748
Replicate 28.6607512016605
Replicate 37.7152993358329
Condition 2: 8 Hour
Replicate 19.8988917804457
Replicate 211.8590028606
Replicate 311.604616174632
Condition 3: 24 Hour
Replicate 19.4515111950708
Replicate 28.1174110230471
Replicate 38.0941804394642


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52054.p1 GENE.S_Transcript_52054~~S_Transcript_52054.p1 ORF type:complete len:349 (+),score=90.93,GLTSCR1|PF15249.2|12,GLTSCR1|PF15249.2|3.4e-15 S_Transcript_52054:143-1048(+)
ATGGCTCGCTTCCCTTCCAATATCGACGCTCATTTACGCCCTCTCGGTGGCCCCCGCCCTCTCAACTTATCCCAAACCCCTAACCCCAGCCCTAACCCTAATTCCTCAAACCCTAATTCGAGCCCCCAGCAACAACACAAGGTTAGTAGACCACAGTCGCAGCCAGTGCAGGCGCCTTTGGGTGGTAATCAGGCTGAGCTTCAGATGGCTTATCAAGATGCTTGGCGTGTTTGTCGTCCCGATTTTAAACGCCCTTTCGCCTCTCTTGAAGATGCTTGCGAAAGGCTCCTACCATACCATGTTGTGGCAGATTATGAAGCGGAGGAAGATGATAGAATACTTGATTCTGACACCACAGGCCAAATACTTTCTAGATCCCAGCAATGGGACCACAACATTGCTGCTAAAGTAGCGGAGTTTACAGCCACCTTTGAGAAACAGGCTCTAGCGTTCAATATAATAACTCGAAAGTGGGCCATGGGGGAGTTCCGATCAGAGGAGAGATTGATGATTGAACAGGCTCTTTTGCAAGAAGAAAAGCGAGCCATTATGGAGCTGAGGGCAGAAATTGAGTCAAGAGAGAAAGCTGGTCGAGAGGCGCATGAGGCCAAGTTGCGGATGGCAGCAGCCATCCAGGCTGAGCAAGCTCGAGTTGAATCACAAGCACATGCTGATTTGATGACTCGAGCTCCAATTAGGGCTGGTCTTCTTGGATCACAAGGCAGTGATGACCAGGATCAAGGGATGAATCCAGATGAAATGATCAATGGGTGGGGGAACAATGCTCAGAGAGATGAGAGAGAACCCTCCGACGATTTCCTGAATGACGAGGAAGCTGAAAATGGAGACACGGGAATGCAAGATGAGTGGCGTGAAAGCGGGGAGTTTGATTTGAACACCAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52054.p1 GENE.S_Transcript_52054~~S_Transcript_52054.p1 ORF type:complete len:349 (+),score=90.93,GLTSCR1|PF15249.2|12,GLTSCR1|PF15249.2|3.4e-15 S_Transcript_52054:143-1048(+)
MARFPSNIDAHLRPLGGPRPLNLSQTPNPSPNPNSSNPNSSPQQQHKVSRPQSQPVQAPLGGNQAELQMAYQDAWRVCRPDFKRPFASLEDACERLLPYHVVADYEAEEDDRILDSDTTGQILSRSQQWDHNIAAKVAEFTATFEKQALAFNIITRKWAMGEFRSEERLMIEQALLQEEKRAIMELRAEIESREKAGREAHEAKLRMAAAIQAEQARVESQAHADLMTRAPIRAGLLGSQGSDDQDQGMNPDEMINGWGNNAQRDEREPSDDFLNDEEAENGDTGMQDEWRESGEFDLNTR*

Click here to download the sequence:
Link to NCBI Protein BLAST