Transcript Information: S_Transcript_520550.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-18
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.19739866446818
Replicate 30
Condition 3: 24 Hour
Replicate 10.12849931465055
Replicate 20.1333165386844
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_520550.p1 GENE.S_Transcript_520550~~S_Transcript_520550.p1 ORF type:5prime_partial len:340 (+),score=45.20,zf-RVT|PF13966.2|1.4e+04,zf-RVT|PF13966.2|2.5e-16 S_Transcript_520550:3-1022(+)
CATTGGACCACTAAGCTGCTGACTTATGCTGGTAGGAAACAGCTTATACAAGCTGTTCTGTTTGGGATACAGGCTTATTGGGATCAGATGTTCATTATCCCCAAAAAAATCCTTAAAATGGTTGATACTGTATGCAGAACCTTCTTATGGACAAGCTGCTGCTCCATCAGTAAAAGAGCATTAGTTGCTTGGGATAGAATGTGTCTACCAAGTTGGGCAGGTGGACTAAATCTCATCAATATCCACATCTGGAATAGAGCTAGCATACTTAAACTCCACTGGGATTTGGCTAACAAGAAAAACAAGCTTTGGATTCAGTGGGTTCATGTTTATTATTTCAAGAAAAGAAGATTTGATGCTGAGATTGAGTGTAGTAGAGCCAGTTGGATGGTCCAGAAAATCATCAAAGCTGGAAAGTACATCCAAGATACTTGTGATTGGGAGGAGATTGTTCATCAACAGAAAGTAGTACCTAGACAAGCATATCTGAAGCTGCTAGGACAGAAACAAAAGAAAGATTGGAGAAAACTGGTCATAAGCAATGCAGCAAGGCCTAAAGCTGTGTTCATTTTATGGCTAGCCTTATGGGAGAGGCTAAGTACAGCAGATAGACTACAGAAGTTTGGTATTCACTGTCCCCTGCTCTGCTCTTTGTGTAAGGCAGAAAATGAAAGTTTAAACCATCTTCTGTACCATTGCTCCCGGAATACTCAGATTTGGAGGAAGATATTTAGTTGGCTTCATACTCCCTACCCAATTGATATCAAGCACGCCATTCTCAAATATAGTAAACACAAAGGAAGAGGCAAACTGATAAAGATAATGGCTGCTGAGATAATCTATGTTGTATGGATGGAGAGAAACAGGAGAAGGTTTAATGACCAGTCATGCACAACTGCTGATCTGATTAGAGATATTCAGCTCTATATTAGCATTAGAGCTACAACTAAGGGCATTGATAGCTCAGAGTTAGGATTGGATGAGCATGTGATGAATAAGACCTATGTCAACCCTCCCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_520550.p1 GENE.S_Transcript_520550~~S_Transcript_520550.p1 ORF type:5prime_partial len:340 (+),score=45.20,zf-RVT|PF13966.2|1.4e+04,zf-RVT|PF13966.2|2.5e-16 S_Transcript_520550:3-1022(+)
HWTTKLLTYAGRKQLIQAVLFGIQAYWDQMFIIPKKILKMVDTVCRTFLWTSCCSISKRALVAWDRMCLPSWAGGLNLINIHIWNRASILKLHWDLANKKNKLWIQWVHVYYFKKRRFDAEIECSRASWMVQKIIKAGKYIQDTCDWEEIVHQQKVVPRQAYLKLLGQKQKKDWRKLVISNAARPKAVFILWLALWERLSTADRLQKFGIHCPLLCSLCKAENESLNHLLYHCSRNTQIWRKIFSWLHTPYPIDIKHAILKYSKHKGRGKLIKIMAAEIIYVVWMERNRRRFNDQSCTTADLIRDIQLYISIRATTKGIDSSELGLDEHVMNKTYVNPP*

Click here to download the sequence:
Link to NCBI Protein BLAST