Transcript Information: S_Transcript_5206.p1


Annotated TAIR IDAT5G39110.1
Annotated Gene NameRmlC-like cupins superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:15657802-15658584 | Reverse length=222
E-Value1E-58
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.982626252336
Replicate 234.626322499988
Replicate 323.394952254197
Condition 2: 8 Hour
Replicate 160.816853867379
Replicate 262.558317492569
Replicate 397.697634856164
Condition 3: 24 Hour
Replicate 137.217208909901
Replicate 257.603854423216
Replicate 356.866368635609


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5206.p1 GENE.S_Transcript_5206~~S_Transcript_5206.p1 ORF type:5prime_partial len:216 (+),score=16.60,Cupin_1|PF00190.18|2e+03,Cupin_1|PF00190.18|6.4e-41,Cupin_2|PF07883.7|2.9e-07 S_Transcript_5206:2-649(+)
GTTCACACATCCTATGCTTCTGATCCTGGTCCCTTACAGGATTTTTGTATTGGTGTAAGTGATCCTCACAATACTGTATTTGTTAACGGTATGTATTGCAAGAATCCAAAGGATGTTACATCAAATGATTTCTTGTACAAAGGCTACAATATGGTCGGAGACACAAACAACCGCTTAGGATCTAAGGTTGTGCAAGTAAATGTCACCACATTCCCCGCTCTCAACACACTAGGGGTGGCAATGGGTCGTGTAGACTTTGCACCGAGTGGCCTGAACTCTCCACATTTCCACCCTCGGGCCTCGGAGATGTTAACGGTCATAGAGGGTACCTTATATGCAGGGTTTGTGACCTCAAATTTACTAAATGGTGCTAATAAGCTATACTCCAAAGTGCTAAACAAGGGGGACATATTTGTCTTTCCACAAGGACTCATTCACTTTCAACTCAATCTTGGCGACACACCAGCCGTGGCTAATGTTGCCTTTGGTAGCCAACAACCAGGCTTGGTTAATGTTGCTAGTGCTTTATTTAGCTCACAAATTTCAGATGATGTTCTTACCAAAGCCTTCCAAGTGAATGAGAAAATGGTCGAATCTCTTCGAGCTCAATATTTGTCTGAAAATCAATCAAGGCATTTCGACCTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5206.p1 GENE.S_Transcript_5206~~S_Transcript_5206.p1 ORF type:5prime_partial len:216 (+),score=16.60,Cupin_1|PF00190.18|2e+03,Cupin_1|PF00190.18|6.4e-41,Cupin_2|PF07883.7|2.9e-07 S_Transcript_5206:2-649(+)
VHTSYASDPGPLQDFCIGVSDPHNTVFVNGMYCKNPKDVTSNDFLYKGYNMVGDTNNRLGSKVVQVNVTTFPALNTLGVAMGRVDFAPSGLNSPHFHPRASEMLTVIEGTLYAGFVTSNLLNGANKLYSKVLNKGDIFVFPQGLIHFQLNLGDTPAVANVAFGSQQPGLVNVASALFSSQISDDVLTKAFQVNEKMVESLRAQYLSENQSRHFDL*

Click here to download the sequence:
Link to NCBI Protein BLAST