Transcript Information: S_Transcript_52076.p1


Annotated TAIR IDAT4G21190.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1417
Annotation TypeOrtholog
Chromosome Positionchr4:11292493-11293763 | Reverse length=307
E-Value2E-122
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.815726448336
Replicate 213.615892984066
Replicate 315.860753031897
Condition 2: 8 Hour
Replicate 114.196616982549
Replicate 216.363409290772
Replicate 315.347410275587
Condition 3: 24 Hour
Replicate 110.860027792467
Replicate 211.72042827234
Replicate 313.980218898836


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52076.p1 GENE.S_Transcript_52076~~S_Transcript_52076.p1 ORF type:complete len:350 (+),score=76.60 S_Transcript_52076:243-1292(+)
ATGAGTTTAGGTTTAAACTTGAAAATGTCGTTGAAACTTGAACCCGCCAGCAAGGGATATAGTGGGAAACTTCCAAGTTTCAAGCTTTTCAACAATGGCTGCTCTTTCAATATGCTCAGCTTGAGGTACCCTTCCCAAATTATAACCCCTAGCTTGGATTCCACCACCAGCACCTCAAGAAATTTTATTGTATGTGGGTTAAAAGGTCCAAGACCAAGATATCCTAGAGTATGGAAAACCAGAAAAAGAATTGGGACAATCTCCAAGTCTCAAAAGCTAGTTGATTGTATAAAGGAATTATCAAATGTTAAAGAAGAAGTATATGGTGCTCTTGATGCATTTATTGCTTGGGAATTAGAATTCCCCCTTATTACGGTGAAGAAAGCTTTGAAGACCTTAGAGCATGAAAAGGAATGGAAGAGAATAATTCAGGTGACAAAATGGATGCTAAGCAAAGGTCAAGGGAGGACAATGGGAAGCTATTACACGTTGCTGAATGCATTAGCAGAAGAGGATAGGCTAGAAGAGGTTGAAGAGCTTTGGACGAAGTTATTTTCAGAGAATCTGGAAAGCATGCCTCGCTCTTTCTTTGACAAGATGATTAGCGTTTACCATGCCAGAGGGATGCATGACAAGATGTTTAATACATTTGCTGACATGGAAGAGCTTGGTATTCGGCCGACTACTTCAATTGTTTCAAAGATTGGAGATGTCTTCCAAAAACTCGGGATGATGGACAAATATGAAAAGTTGAATAAAAAATATCCTCCACCTAAATGGGAATTCCGGTACATCAAGGGCAAACGTGTTAAAGTCCGTGCGAAGCAGCCTAATGAATCCTCTGATGAAGGTGAAGATATACCCACGAAGCAGCTGAATGAATCCTCTGATGAAGGTGAAGATACACACGTGTCTAGTGGGGAAAGAGGGGAGTCTATTGACAGTATTGTAGCTGTGAATGCTTCTGCTGAAGAATATGATCAGCAATTGACAGGGCAGCAGGAAGACAGCTGGAGACCTATTCTACTTGAAAATGAGCAGGGAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52076.p1 GENE.S_Transcript_52076~~S_Transcript_52076.p1 ORF type:complete len:350 (+),score=76.60 S_Transcript_52076:243-1292(+)
MSLGLNLKMSLKLEPASKGYSGKLPSFKLFNNGCSFNMLSLRYPSQIITPSLDSTTSTSRNFIVCGLKGPRPRYPRVWKTRKRIGTISKSQKLVDCIKELSNVKEEVYGALDAFIAWELEFPLITVKKALKTLEHEKEWKRIIQVTKWMLSKGQGRTMGSYYTLLNALAEEDRLEEVEELWTKLFSENLESMPRSFFDKMISVYHARGMHDKMFNTFADMEELGIRPTTSIVSKIGDVFQKLGMMDKYEKLNKKYPPPKWEFRYIKGKRVKVRAKQPNESSDEGEDIPTKQLNESSDEGEDTHVSSGERGESIDSIVAVNASAEEYDQQLTGQQEDSWRPILLENEQGT*

Click here to download the sequence:
Link to NCBI Protein BLAST