Transcript Information: S_Transcript_52077.p1


Annotated TAIR IDAT4G21190.1
Annotated Gene NamePentatricopeptide repeat (PPR) superfamily protein
Annotated Gene Symbol(s)emb1417
Annotation TypeOrtholog
Chromosome Positionchr4:11292493-11293763 | Reverse length=307
E-Value1.6E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.2425558452892
Replicate 25.1752222418862
Replicate 34.4968399710014
Condition 2: 8 Hour
Replicate 15.989538638454
Replicate 24.4881795110563
Replicate 35.2631722481435
Condition 3: 24 Hour
Replicate 14.1127712744637
Replicate 25.5960028583574
Replicate 36.5390485494745


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52077.p1 GENE.S_Transcript_52077~~S_Transcript_52077.p1 ORF type:5prime_partial len:324 (+),score=68.72 S_Transcript_52077:2-973(+)
TTAAATCTCTTGTGTCTATTTTGTTCTCTTGGTTGTGATTGTTCTATTCTCGCTCTCCGATTCCGCTTCCGCACAACAGATTCCACCACCAGCACCTCAAGAAATTTTATTGTATGTGGGTTAAAAGGTCCAAGACCAAGATATCCTAGAGTATGGAAAACCAGAAAAAGAATTGGGACAATCTCCAAGTCTCAAAAGCTAGTTGATTGTATAAAGGAATTATCAAATGTTAAAGAAGAAGTATATGGTGCTCTTGATGCATTTATTGCTTGGGAATTAGAATTCCCCCTTATTACGGTGAAGAAAGCTTTGAAGACCTTAGAGCATGAAAAGGAATGGAAGAGAATAATTCAGGTGACAAAATGGATGCTAAGCAAAGGTCAAGGGAGGACAATGGGAAGCTATTACACGTTGCTGAATGCATTAGCAGAAGAGGATAGGCTAGAAGAGGTTGAAGAGCTTTGGACGAAGTTATTTTCAGAGAATCTGGAAAGCATGCCTCGCTCTTTCTTTGACAAGATGATTAGCGTTTACCATGCCAGAGGGATGCATGACAAGATGTTTAATACATTTGCTGACATGGAAGAGCTTGGTATTCGGCCGACTACTTCAATTGTTTCAAAGATTGGAGATGTCTTCCAAAAACTCGGGATGATGGACAAATATGAAAAGTTGAATAAAAAATATCCTCCACCTAAATGGGAATTCCGGTACATCAAGGGCAAACGTGTTAAAGTCCGTGCGAAGCAGCCTAATGAATCCTCTGATGAAGGTGAAGATATACCCACGAAGCAGCTGAATGAATCCTCTGATGAAGGTGAAGATACACACGTGTCTAGTGGGGAAAGAGGGGAGTCTATTGACAGTATTGTAGCTGTGAATGCTTCTGCTGAAGAATATGATCAGCAATTGACAGGGCAGCAGGAAGACAGCTGGAGACCTATTCTACTTGAAAATGAGCAGGGAACTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52077.p1 GENE.S_Transcript_52077~~S_Transcript_52077.p1 ORF type:5prime_partial len:324 (+),score=68.72 S_Transcript_52077:2-973(+)
LNLLCLFCSLGCDCSILALRFRFRTTDSTTSTSRNFIVCGLKGPRPRYPRVWKTRKRIGTISKSQKLVDCIKELSNVKEEVYGALDAFIAWELEFPLITVKKALKTLEHEKEWKRIIQVTKWMLSKGQGRTMGSYYTLLNALAEEDRLEEVEELWTKLFSENLESMPRSFFDKMISVYHARGMHDKMFNTFADMEELGIRPTTSIVSKIGDVFQKLGMMDKYEKLNKKYPPPKWEFRYIKGKRVKVRAKQPNESSDEGEDIPTKQLNESSDEGEDTHVSSGERGESIDSIVAVNASAEEYDQQLTGQQEDSWRPILLENEQGT*

Click here to download the sequence:
Link to NCBI Protein BLAST