Transcript Information: S_Transcript_520890.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.502077039205
Replicate 22.2628502110272
Replicate 34.571276465166
Condition 2: 8 Hour
Replicate 11.4581463464706
Replicate 23.059398104578
Replicate 31.8218673166651
Condition 3: 24 Hour
Replicate 12.6139176826352
Replicate 21.9370779125083
Replicate 32.8024493783462


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_520890.p1 GENE.S_Transcript_520890~~S_Transcript_520890.p1 ORF type:5prime_partial len:117 (-),score=8.40,zf-RVT|PF13966.2|1.3e-06,zf-RVT|PF13966.2|3.3e+03,zf-RVT|PF13966.2|2.9e+03 S_Transcript_520890:76-426(-)
CAAATGGTTAATAGGTGTATCCTTTGTAAAGCTCAACAGGAGACAAGGAATCACTTGTTTTTTGATTGCTATTTGGCTAAGGCAGTCTGGCGTGAAATCCTTTTATGGCTTGGCATTACAAGGAGAGGATGGTCCCTGAAGGGTGAAATCAGGTGGTATCGAAGACATGTAAAAGGGAAGCACCGGAAGAAGAGATGGAGGCGATGCGCTCTTGTTGCCACTGTCTATGAAATCTGGATAGAGCGGAATAATAGAATCTTTGCAGAGAAACATGGAAGTTTACAACAAATAGTTCAGCAGATTAAATTTGTTGTATGTGTTAGGATTCTTTACAAATGCAACCCCCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_520890.p1 GENE.S_Transcript_520890~~S_Transcript_520890.p1 ORF type:5prime_partial len:117 (-),score=8.40,zf-RVT|PF13966.2|1.3e-06,zf-RVT|PF13966.2|3.3e+03,zf-RVT|PF13966.2|2.9e+03 S_Transcript_520890:76-426(-)
QMVNRCILCKAQQETRNHLFFDCYLAKAVWREILLWLGITRRGWSLKGEIRWYRRHVKGKHRKKRWRRCALVATVYEIWIERNNRIFAEKHGSLQQIVQQIKFVVCVRILYKCNPL*

Click here to download the sequence:
Link to NCBI Protein BLAST