Transcript Information: S_Transcript_520974.p1


Annotated TAIR IDAT1G54520.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1517 (InterPro:IPR010903); Has 276 Blast hits to 275 proteins in 83 species: Archae - 0; Bacteria - 108; Metazoa - 6; Fungi - 0; Plants - 113; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:20363565-20365874 | Forward length=391
E-Value2E-13
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10.51386482691887
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_520974.p1 GENE.S_Transcript_520974~~S_Transcript_520974.p1 ORF type:internal len:83 (+),score=4.24,DUF1517|PF07466.7|3.2e-20 S_Transcript_520974:1-246(+)
GTCATACTCGGCATCTTCGCCTTTGTGCTTTTCAACACATTCGCCGGTGGCTCAGACGATGGGTATGAAGACGAGGAGGAGGGACGTGAGCCCATGAGCGTGGTGAAGCTGCAAGTTGGGCTGCTAGGGTCTGCGCGGGACCTACAAAAGGACCTGAACCGATTTGCCAACAACCTCGACACCTCCACGCCGCAGGGCCTGCATTACCTGCTCACAGAAACAGTGCTGGCGCTGCAGCGGAATCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_520974.p1 GENE.S_Transcript_520974~~S_Transcript_520974.p1 ORF type:internal len:83 (+),score=4.24,DUF1517|PF07466.7|3.2e-20 S_Transcript_520974:1-246(+)
VILGIFAFVLFNTFAGGSDDGYEDEEEGREPMSVVKLQVGLLGSARDLQKDLNRFANNLDTSTPQGLHYLLTETVLALQRNP

Click here to download the sequence:
Link to NCBI Protein BLAST