Transcript Information: S_Transcript_52105.p1


Annotated TAIR IDAT4G19020.1
Annotated Gene Namechromomethylase 2
Annotated Gene Symbol(s)CMT2
Annotation TypeHomolog
Chromosome Positionchr4:10414526-10420936 | Forward length=1295
E-Value1E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4834950012854
Replicate 21.4161925729486
Replicate 32.1495756583926
Condition 2: 8 Hour
Replicate 12.9898773586521
Replicate 23.0610130740167
Replicate 33.8887019279358
Condition 3: 24 Hour
Replicate 11.0332039488794
Replicate 22.3352913955358
Replicate 31.5763777753198


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52105.p1 GENE.S_Transcript_52105~~S_Transcript_52105.p1 ORF type:3prime_partial len:592 (+),score=81.57,DNA_methylase|PF00145.13|1.3e+03,DNA_methylase|PF00145.13|0.0033,DNA_methylase|PF00145.13|1.2e-18,BAH|PF01426.14|1.7e-10,Chromo|PF00385.20|1.2e+04,Chromo|PF00385.20|4e-08 S_Transcript_52105:43-1773(+)
ATGGCTGATCAGATTCGAGTCACTGGTACTACCAGGAGGTCTTCTAGACATGCTAAGTTGATTGACTGTCACAATTCAGGTGACAAACAAACCAATCATCAAACGCACAAGAGAACTACAAGAAAGTCCTCTTCTTGTATCTCTTTCTTGATCGGAGACCCCATTCCTGATGACGTGGCTCGCCGGAGATGGCCGTACAGGTACCAGAATACTAACAATAATAAGCGCCATAGAAATAATGGTGGGAGCTCAAATAAGATTGATGACGATGAAGATGAGTTGGTTTTGGATGTAAAGTGTCATTATTCTCAAGCTGAGATTGTGAAGACTGTTTTTGACCTTGGAGATTGTGCATATGTAAAAGGTGAGAAAAGGAAGAAAAACTTTGTTGGTCGGATTATAGAGTTCTTTAGAACCACGGATGATGAAGATTATTTCCGAGTTCAATGGTTTTACAGAGCTGAAGATACTGTAATAGAAGATGAGGCGAAATCTCATGATGCGAAACGATTGTTCATTTCTGATATTATGAATGACAATCCTTTAGATTGTATTGTTTCCAAGGTCAAGATCATCCAAATACCAGCTACCGTGGACTTAAAACAAAACTCTCTTTCTGCCTTTGACTTCTACTACGACATGAAATACTTTGTAGACTATACCACATTTTCAACAAATGTTGATGATGCACCTGACTTGTCTTCATGTGATAGCGTGAAGAAGATTCAAGCAAGCGGGCTTACGCCTAATTTCTGGAACTTTTCCGGCCACAAGCCACACAAGCCCATCATGGCTTTGTTAGACCTGTACTCTGGATGTGGCGGAATGTCGACTGGATTATGCCTTGGTGCGAAACTTGCTGGCGTGAATCTAGAAACGAAATGGGCTCTTGATATCAATAAATCTGCTTGCGAGAGCTTGAGAATAAACCATCCAGAAGCGCAAATAAGGAACGAACCTGCTGAAGATTTTCTCCTCTTGTTAAAAGAATGGGATAAACTCTGTAGTCGCTATGTCGACAATGTTAGAAATAAGACCAGATCTTCTCCGAGGACTCGAAAACAGTCACAGTGCCAGTCTTCTAAAAGTGTAAATATGAGGAGCAAGCACAAGGGTTCAAGTTCAACTGTTGAATATGAGGTTGCCTGCCTTGTCAATATCTGCTATGGTGACCCCAATGACACTGGGAAATGTGGACTTCATTTTCAGGTACGTTGGGCAGGTTATGGCTTGAGTGAGGATACATGGGAGCCAATCGAGGGGCTTAGTAACTGCCAGGAACGGATACAAGAATTTGTGCTGAAAGGATGTAAAGCTGGCACATTACCTCGCCCAGGCGATGTAGATGTGATTTGTGGAGGCCCTCCATGCCAGGGGATTAGTGGGTATAATCGTCATAGAAATGTCGATAACCCTTTAGATGATGAGAGGAACCGCCAGATTGTGATCTTTATGGATATTGTGGAGTATCTCAAGCCAACTTATGTATTGATGGAAAACGTAGTTGACATTTTGAGGCTTGCCAATGGGAGTCTTGGAAAATATGCTATAAGTAGATTGGTTCGTTTGAAATATCAATCAAGTCTTGGAATCATGGCTGCTGGCTGCTATGGCCTTCCACAATTCCGCCTACGTGTTTTCTTATGGGGAGCCCATCCTAATGAGAGATTACCACAATTTCCTCTTCCAACACATGATGTAGTTGTAAGATACGGTGCCCCATACAAATTT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52105.p1 GENE.S_Transcript_52105~~S_Transcript_52105.p1 ORF type:3prime_partial len:592 (+),score=81.57,DNA_methylase|PF00145.13|1.3e+03,DNA_methylase|PF00145.13|0.0033,DNA_methylase|PF00145.13|1.2e-18,BAH|PF01426.14|1.7e-10,Chromo|PF00385.20|1.2e+04,Chromo|PF00385.20|4e-08 S_Transcript_52105:43-1773(+)
MADQIRVTGTTRRSSRHAKLIDCHNSGDKQTNHQTHKRTTRKSSSCISFLIGDPIPDDVARRRWPYRYQNTNNNKRHRNNGGSSNKIDDDEDELVLDVKCHYSQAEIVKTVFDLGDCAYVKGEKRKKNFVGRIIEFFRTTDDEDYFRVQWFYRAEDTVIEDEAKSHDAKRLFISDIMNDNPLDCIVSKVKIIQIPATVDLKQNSLSAFDFYYDMKYFVDYTTFSTNVDDAPDLSSCDSVKKIQASGLTPNFWNFSGHKPHKPIMALLDLYSGCGGMSTGLCLGAKLAGVNLETKWALDINKSACESLRINHPEAQIRNEPAEDFLLLLKEWDKLCSRYVDNVRNKTRSSPRTRKQSQCQSSKSVNMRSKHKGSSSTVEYEVACLVNICYGDPNDTGKCGLHFQVRWAGYGLSEDTWEPIEGLSNCQERIQEFVLKGCKAGTLPRPGDVDVICGGPPCQGISGYNRHRNVDNPLDDERNRQIVIFMDIVEYLKPTYVLMENVVDILRLANGSLGKYAISRLVRLKYQSSLGIMAAGCYGLPQFRLRVFLWGAHPNERLPQFPLPTHDVVVRYGAPYKF

Click here to download the sequence:
Link to NCBI Protein BLAST