Transcript Information: S_Transcript_52157.p1


Annotated TAIR IDAT4G14615.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2346 (InterPro:IPR018625); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52825.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:8383842-8384814 | Forward length=76
E-Value8.4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 174.769860613126
Replicate 268.026934469004
Replicate 363.451794382864
Condition 2: 8 Hour
Replicate 1101.54947770063
Replicate 2102.53763959875
Replicate 392.622433045455
Condition 3: 24 Hour
Replicate 161.113662146305
Replicate 258.817987186235
Replicate 369.660884547463


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52157.p1 GENE.S_Transcript_52157~~S_Transcript_52157.p1 ORF type:complete len:84 (+),score=11.23,DUF2346|PF09803.5|2.4e-10 S_Transcript_52157:223-474(+)
ATGTCGTCACTAGGAGCAGGAAAGGGGCTATTGGAGGTGGGAAAATTCGCAGTTTATGTCTCAATTCCAATACTACTTATGTACACTTTCGCCAACAATTCCAAGAATCTTCACAAATTTATGGGTGGCCGGTCTTATGTGGCATATCCTCCTGAGGGACCACGACCTCAATCACCAGAAGAGCTGCGGGAAATGGCACGAGAATTAGCTCGTAAGAGGAGTAGCCAATCATCACCTAGTGCAGGACTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52157.p1 GENE.S_Transcript_52157~~S_Transcript_52157.p1 ORF type:complete len:84 (+),score=11.23,DUF2346|PF09803.5|2.4e-10 S_Transcript_52157:223-474(+)
MSSLGAGKGLLEVGKFAVYVSIPILLMYTFANNSKNLHKFMGGRSYVAYPPEGPRPQSPEELREMARELARKRSSQSSPSAGL*

Click here to download the sequence:
Link to NCBI Protein BLAST