Transcript Information: S_Transcript_521979.p1


Annotated TAIR IDAT3G13235.1
Annotated Gene Nameubiquitin family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:4271492-4274348 | Reverse length=414
E-Value1E-30
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.15898910416897
Condition 2: 8 Hour
Replicate 10.36767914339884
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.19537768600299
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_521979.p1 GENE.S_Transcript_521979~~S_Transcript_521979.p1 ORF type:3prime_partial len:116 (+),score=11.26,Asp_protease|PF09668.6|2.5e-42,Asp_protease_2|PF13650.2|1.3e-06 S_Transcript_521979:2-346(+)
ATGGACCCAGAGTACCAGCGCAAAGCCATGGAGGCCATTCAGCAGCAGGCAATCCAGGACAATTTTGAGCATGCAATTGAGTACACACCTGAGGTGTTTGGCCGCGTGGACATGCTGTACGTGGACATGACCACAAACGGCGAGCCCTTGAAGGTATTTGTGGACTCGGGCGCGCAGATGTCCATCATGACGCAATCTTGTGCCGAGAAGTGCAACCTCATGCGGCTAGTCGACAAGCGCTGGCAAGGCATGGCGGTCGGAGTTGGGTCGAACCCCATTATTGGCCGCATTCACGCATGCAACTTGAAGGTCGGAGATCAGTTCATCACCACTTCCATCACAGCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_521979.p1 GENE.S_Transcript_521979~~S_Transcript_521979.p1 ORF type:3prime_partial len:116 (+),score=11.26,Asp_protease|PF09668.6|2.5e-42,Asp_protease_2|PF13650.2|1.3e-06 S_Transcript_521979:2-346(+)
MDPEYQRKAMEAIQQQAIQDNFEHAIEYTPEVFGRVDMLYVDMTTNGEPLKVFVDSGAQMSIMTQSCAEKCNLMRLVDKRWQGMAVGVGSNPIIGRIHACNLKVGDQFITTSITA

Click here to download the sequence:
Link to NCBI Protein BLAST