Transcript Information: S_Transcript_522257.p1


Annotated TAIR IDATMG00520.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)MATR
Annotation TypeHomolog
Chromosome PositionchrM:144294-146312 | Reverse length=672
E-Value9E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.16222639380526
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.55636862658344


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_522257.p1 GENE.S_Transcript_522257~~S_Transcript_522257.p1 ORF type:internal len:136 (+),score=-3.07,RVT_1|PF00078.23|3.8e-17 S_Transcript_522257:1-405(+)
CAACGCGGAAACTCCACCCCGGGGGCGGACAAAGCTACCTTGGACGGTATCGGCCTAGCTTGGATCGAAGGCATAATAAAGTCGATGAAAAACCGGGATTTTCAGTTTAAATCAGCAGTACGTAAATTTATCCCTAAACCAAATGGGAAACTACGTCCCTTAGGAATACCAACGCCTAAGGATAAGGTAGTACAACAGTCAATCCGGCTAATAATCGAACCGCTATTTGAACCTCATTTTCTGAATTCTAGCCATGGGTTTAGACCAAACCGTTCTGCACACACAGCTTTGAAGGAAATTAAAAAGTGGACGGGCATTACATGGATGATTGAAGGAGACATCAAAGGATGTTTTGACAATGTGGACCACCATATATTAGAAACACTTTTGAAGCGCCGAATTAAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_522257.p1 GENE.S_Transcript_522257~~S_Transcript_522257.p1 ORF type:internal len:136 (+),score=-3.07,RVT_1|PF00078.23|3.8e-17 S_Transcript_522257:1-405(+)
QRGNSTPGADKATLDGIGLAWIEGIIKSMKNRDFQFKSAVRKFIPKPNGKLRPLGIPTPKDKVVQQSIRLIIEPLFEPHFLNSSHGFRPNRSAHTALKEIKKWTGITWMIEGDIKGCFDNVDHHILETLLKRRIK

Click here to download the sequence:
Link to NCBI Protein BLAST