Transcript Information: S_Transcript_52237.p1


Annotated TAIR IDAT1G47530.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:17451724-17454110 | Forward length=484
E-Value6E-256
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 124.440511338431
Replicate 227.555973896325
Replicate 320.249371455055
Condition 2: 8 Hour
Replicate 123.370886939389
Replicate 224.152465164113
Replicate 324.317466961601
Condition 3: 24 Hour
Replicate 123.405232311351
Replicate 221.646252689246
Replicate 320.486476884156


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52237.p1 GENE.S_Transcript_52237~~S_Transcript_52237.p1 ORF type:complete len:490 (+),score=88.41,MatE|PF01554.14|2.8e-34,MatE|PF01554.14|1.1e+03,MatE|PF01554.14|9.3e-24 S_Transcript_52237:434-1903(+)
ATGGAGGATGGAAAGTCTCTATTAAAAGAAGAAGAAGAGGAGGAGGAGAATCAGCTGCTGATTAATACTAAGCAACCAGTACAACAGCTTAGCCCAGCAAAAGAGTTCAGCGATGAGTCAAGGAAATTATGGAATATTGCTGGACCAGCAATCTTCACAGCAATTTGCCAGTACTCTCTTGGGGCTTTGACTCAGACCTTTGCTGGTCTTGTCGGTGATCTTGAACTTGCTGCTGTCTCCGTTGAGAATTCCGTCATTGCTGGCCTTGGCTTTGGCGTTATGCTAGGAATGGGTAGTGCGTTGGAAACACTTTGTGGCCAAGCATATGGTGCTGGCAAACTCAGGATGTTGGGGATATACATGCAGAGATCATGGGTTATCTTGCTACTCACGGCCTGTCTCCTAACCCCAATATATGTATATTCTCCATGGATTCTCCAACTTTTCGGGACATCTGAAGAAATCTCTCAAGCTGCAGGAAAATTTGCTGTGTGGATGCTCCCTCAACTCTTTGCCTATGCTTTGAATTTCCCTATACAAAAATTCTTGCAATCGCAGCGGAAAGTGTTTGTGATGGCCTTGGTCTCTGCCATAGTGCTGGTGATACACACAGTGTTGAGCTGGGTGTTTATGCTTAAGCTTGGATGGGGCTTGGCAGGAGCAGCCATCATGCTTAACACCTCTTGGTGGCTTATTATCATTCTGCAACTTCTCTATATTTTCATCACAAAGTCGGATGGTGCTTGGTGTGGATTTTCGTGGCTGGCATTCAGTGACTTGTGGGGCTTTGTGCAGCTCTCGCTGGCATCTGCTGTAATGTTGTGCTTGGAGTTCTGGTACTTGATGGTGCTAGTAGTGATTACAGGTCGTCTGCCCAACCCTTTGATACCCGTTGATGCTATCTCCATTTGCATGAACCTACAAGGATGGGATGCCATGATTGCAATCGGTTTCAATGCTGCTATCAGTGTGAGAGTATCAAATGAACTCGGAGCTGGCAATTACCGGCAAGCAAAGATTTCTGTGATAGTCGTTTCCGTGACTTCTGTGGCCATTGGTTTTGTTGCCTTCTTAGTCGTTCTTTCCAGTAGAGATTGGTTCCCTTTCCTTTTCACACAAAGTGTACCTGTTGCGGTGGAAACTACAAGGCTTTCAATCTTGTTGGCATTCACAGTTCTTCTCAACAGCCTTCAACCTGTTCTATCAGGAGTTGCTATTGGAGCAGGATGGCAGGCGCTTGTTGCATATATTAATATCGCCTGCTACTATTTATTTGGATTGCCTGCCGGAATTTTTCTTGGATTTAAATTTGGGCTTGGAGCCATGGGAATTTGGGGAGGGATGATTGGTGGAATCTGTTTGCAGACGATTATTTTGATTGTAATGACATCTCTCACAAATTGGAAAAAGGAAGCGGATGAAGCAGAGAGTAGGGTACGGAAATGGGGAGGATCAGCTGCTGCTGATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52237.p1 GENE.S_Transcript_52237~~S_Transcript_52237.p1 ORF type:complete len:490 (+),score=88.41,MatE|PF01554.14|2.8e-34,MatE|PF01554.14|1.1e+03,MatE|PF01554.14|9.3e-24 S_Transcript_52237:434-1903(+)
MEDGKSLLKEEEEEEENQLLINTKQPVQQLSPAKEFSDESRKLWNIAGPAIFTAICQYSLGALTQTFAGLVGDLELAAVSVENSVIAGLGFGVMLGMGSALETLCGQAYGAGKLRMLGIYMQRSWVILLLTACLLTPIYVYSPWILQLFGTSEEISQAAGKFAVWMLPQLFAYALNFPIQKFLQSQRKVFVMALVSAIVLVIHTVLSWVFMLKLGWGLAGAAIMLNTSWWLIIILQLLYIFITKSDGAWCGFSWLAFSDLWGFVQLSLASAVMLCLEFWYLMVLVVITGRLPNPLIPVDAISICMNLQGWDAMIAIGFNAAISVRVSNELGAGNYRQAKISVIVVSVTSVAIGFVAFLVVLSSRDWFPFLFTQSVPVAVETTRLSILLAFTVLLNSLQPVLSGVAIGAGWQALVAYINIACYYLFGLPAGIFLGFKFGLGAMGIWGGMIGGICLQTIILIVMTSLTNWKKEADEAESRVRKWGGSAAAD*

Click here to download the sequence:
Link to NCBI Protein BLAST