Transcript Information: S_Transcript_52244.p1


Annotated TAIR IDAT2G36370.1
Annotated Gene Nameubiquitin-protein ligases
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:15247894-15252800 | Forward length=898
E-Value2E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.8924163318769
Replicate 26.7100941476626
Replicate 35.3398676251787
Condition 2: 8 Hour
Replicate 17.886762355728
Replicate 27.9471773756693
Replicate 36.8459656541546
Condition 3: 24 Hour
Replicate 17.3347783983017
Replicate 27.4994607649227
Replicate 37.1799980423323


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52244.p1 GENE.S_Transcript_52244~~S_Transcript_52244.p1 ORF type:5prime_partial len:411 (+),score=64.72,LRR_4|PF12799.3|2.1e+02,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|1.5e+03 S_Transcript_52244:2-1234(+)
GTGATGGCGATGAATAAAAGTTGTCTAACGGCATCAGCCATTAATCTACAAATGCTGGATATAGGTGGCTGCAACGGTGTTAGTGAATCATCTCTCCTAGAGATCTTGTCTCAGGGATGCATGCTCAACAGTCTTTGCTTGAGGGATACTTGCCTCGTTGATCAAGCACTCTATGGTTTCTCGGGTTCTTCATTGGAGAAGCTTGATGTTTCTAACACTAAGATTTCAGGAGCAGCATTATCGCATATGATTGCTAAGAGTCCTGGCCTGAAGTATTTGGAAGCAAGGGGATGTCGAAACTTAATTCATCATCAAAGCGAGTCCAGCACTGTGCCTCATCATCATTGTGAGGAGCTGTTCAATTTGTTGGGGAGGAAATGCAAGTTAGACTGGCTCGCAATTGGATGGGGATTTTCATTTCCCGCTCTTGTTGCAGTGCAATCTGCTTTAATGTCTCTGAAAGAAATAAATGTGGGTTTGGGTGGCTCACTAGGTCCAGAAGGGCTGAATATGCTGTGTGATTGGTGTCCTTTACTTGAGTCTATCACCGTTCTATTTCAGGTGATATCTGATACTATCATCGTGAAAATGATGGAAGCACTGAGAAACCTGCAGGCATTGTCTATCTGCTATTGTGTTGGAGATATATCTCCATGGAGTTTGAAGCACAGTGTGCCGAATTTAAGAAGATTGAATCTGGCAAGAGTGACGCCTTGGATGACCAATAATGAGTTAATTGTACTGGTGCAGAACTGTGCAAACTTGGTTGAACTTTCATTGGCGGGCTGCTCACTTCTAGATATAGATTCTCAACAGATCATCTCTTCTGGTTGGCCTGGCTTGATTACACTCCATCTAGAGGACTGTGGAGCAGTGACAGCCAACGGGGTTGATTTTCTGTTTGACTGCAAAGCCATGGAGGACCTCCTGCTTCGCCATAATGGCCCTGGAATCCCAAGAAACTTTATACTTGAGGCTGCTTCAAAACTGCCAATGCTACGAAGTATATCCTTAGATTGGTGTGATGCAAGTGAAGGTGACTATGACCTACCACAATTTGCTGACAGGTACTCCCTGAGCACCGTGAAAATATCAAGATGCAAGCTCCAAAACTGTACATTAGACTTCCATAATATGGAGGCTCAGAAGAGGCCAGTGCACAAGGAAACTTTAGTTCTCGTGTGGAAAAGTACCAGTCTCCAAAGGGTGGTTGTCAAAGAGAGACTCACATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52244.p1 GENE.S_Transcript_52244~~S_Transcript_52244.p1 ORF type:5prime_partial len:411 (+),score=64.72,LRR_4|PF12799.3|2.1e+02,LRR_4|PF12799.3|2.7,LRR_4|PF12799.3|1.2,LRR_4|PF12799.3|5.3,LRR_4|PF12799.3|0.3,LRR_4|PF12799.3|1.5,LRR_4|PF12799.3|1.5e+03 S_Transcript_52244:2-1234(+)
VMAMNKSCLTASAINLQMLDIGGCNGVSESSLLEILSQGCMLNSLCLRDTCLVDQALYGFSGSSLEKLDVSNTKISGAALSHMIAKSPGLKYLEARGCRNLIHHQSESSTVPHHHCEELFNLLGRKCKLDWLAIGWGFSFPALVAVQSALMSLKEINVGLGGSLGPEGLNMLCDWCPLLESITVLFQVISDTIIVKMMEALRNLQALSICYCVGDISPWSLKHSVPNLRRLNLARVTPWMTNNELIVLVQNCANLVELSLAGCSLLDIDSQQIISSGWPGLITLHLEDCGAVTANGVDFLFDCKAMEDLLLRHNGPGIPRNFILEAASKLPMLRSISLDWCDASEGDYDLPQFADRYSLSTVKISRCKLQNCTLDFHNMEAQKRPVHKETLVLVWKSTSLQRVVVKERLT*

Click here to download the sequence:
Link to NCBI Protein BLAST