Transcript Information: S_Transcript_52250.p1


Annotated TAIR IDAT5G23150.1
Annotated Gene NameTudor/PWWP/MBT domain-containing protein
Annotated Gene Symbol(s)HUA2
Annotation TypeOrtholog
Chromosome Positionchr5:7786173-7792080 | Forward length=1392
E-Value9.7E-180
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4625182033675
Replicate 29.4691729291158
Replicate 311.00795802731
Condition 2: 8 Hour
Replicate 112.598840500131
Replicate 212.906088181389
Replicate 312.482086260432
Condition 3: 24 Hour
Replicate 112.355359819615
Replicate 28.9788862544
Replicate 310.474489335921


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52250.p1 GENE.S_Transcript_52250~~S_Transcript_52250.p1 ORF type:3prime_partial len:1151 (+),score=331.51,PWWP|PF00855.13|8.9e-17,CTK3|PF12243.4|1.3e+04,CTK3|PF12243.4|1.6e-08,CTD_bind|PF04818.9|2.5e-06 S_Transcript_52250:303-3752(+)
ATGGCTCCGTGGCGTAAAAGAGGAGCCAATAATAATAACAATAATAACAAAGCAGCAGCTCAAACTGCTATGGAGTTCAGTTTAGGCGATCTCGTTCTTGCTAAGGTTAAAGGATTCCCTCCTTGGCCTGCTCAGGTTAGCAGGCCTGAAGATTGTGGGCGTACACCTGACTTCAAAAAGTATTTCGTACGGTTTTTTGGAACCCAAGAAATAGCTTTTGTTGCCCCAGCTGACGTCCAAGCATTTACTGTTGAGGCTAGGAGTAAGGTATTGGCTAGATGCAGAGGGAAAACAGTCAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGAAGCCTTTGAAGAGCTGCAGCAAAGTGATTTAAATATAGTTGCTCGTCAACATTATACTGCTGATGTTGAAGGAGAGGAAATCAAAGGATCTGAAGGTCATCAAGATCGTGAATGTAGTAATGTTGGATTTGATCCTGCATCTTCTAGGGGGGAAAGTACTTTAGGCTCCAAGCCTGAGAAGCGAGCTGTCAACGCAGAAGAGGTTGACCAATTTCCTGATTATTCAGAGATGTTTAAAAAAATTGTTAAAGATGGTACCCTTGCACCTAAGGAGGGTGGAACATCAACTCCTAGTCCAACCATCCCTTCATCTACTAAGGGAGATACAAATTCTACTGAGATCAAAGCAGATATAGTTTCTTTTAACGAATGTTTACAATCGTCAAGGACTCCAAGCTCCAGTCCTTATAGTGGTCGTCCTAATGGGGAACGAGATGCCAATCATCAGAAGACTGGTAAGAAACATAATCTCGCAGGAGCTTCAGGTCAGCCTAAGGCTCCTACTGGGGGGGATAAGAAGGCAGCAAATGGACACAAATCAAAGGAATTACTTGTTGGATCAAAGAGAAAACTTGAGGGTGTTGTCCGCCATAAGGATGATGCTAAATCTTGTGGACATGTAAATGATTCACTTGTTGAGAAGGTTGCCTCTGGTGGAAATGACAAACATTTGTCTCCAGTTGCAAACAGCTCAGAGCCAATTCCACGTGGAAAGGCTTTGAAGAACCAGCTGAAGGACCAAAAGCATTTGGATGTTGGCAAGTCACCAAAGGATGCAGTTGCCATTATTAGGGAGCATGGTGACAGTGATCATTTTATTAATCAGAAAAGTGGCAAATTTGGCCTTGAACAGTCACAGCCTGTTAGAAAGGCTAAGCATGTAGAATTGACGAGGGATGCTGCCAAAGGGACAATCTTAAAAAATGGAAAGAGTGACTTGGAATCTGGCATTCGTGATGATGAGTCTGGTTTACCTCTAGTAAAGCGTCAGCGAGCTTTAGAATCCATGTCTGATGTAAAATCCCCACCTGAGGATAAAATAATTTTTGGTCCTGCAACTTTTAAAATTGATGTACCAAAGAAAAGGAGAGCCGTTCGCTTGTATGATGATGATGATGGAGAACCAAAAACTCCGGTTCATGGAGGGTCTTTTAAAAATTCATCTGTGGTGAACTTGGATTCTGCAAGAAAGACTGATGAGAATCGTGAAATTTCTTATCGACGTGAAGAGAATTTTAAAAGTTCTACTGGAGATCGGAGTGGCTTTAAGAAGGATTATACTCAAAAGTTAGTCAGTGAATCTTCCGTAACTGCTGCGTTGCAGCATAAGGTAGACAGTTCTTTGAAAGTGCAGGCATCTCATAGCCCCACAATAGAAGATTTAGACAAGCCACACTTGAAGGAGCCTAATGTAGATTTGTTTTCCCCTTCAAAGTCTCCTATTGTGGTTTCTGTTGCTAACAAATTACTTGATCAACAGAGACCTGATAGAGCTCCCATCAAAGGGTCCAGTGGAGGTTCTCACAGTAAAGCTTTTAATAGCTCTGCTAAGGGTGCAAATTTGGTTTCCTCATTGAACTCTTCCCAGAGTCAAGTTTCTACCCAGAAAAGTAGGCATTTTTTGTCAGGGGAGAGACCAAGAGGTACTTCAAAAATGAGTATGAGATTGAATGAGCCTGGTGCCTCATTGGATAACCAGAAGGAAGATTCTTCCATGCAAGATGGAAGATTGGAAGATGCCAAGGAGAGAACCGGTTCTTTAGCAGAACCAAAGCCAGGAGATGCTTCAATTTCCATGAAACATCTAATTGCTGCAGCTCAAGCTAAAAGGCGGCAAGCCCAAATGCAAAATATTGGTCATGGTAATGAGAACTCTGTACTGGCACCTGCTGCTAATATTCAAGTGAGGAGTCCGAGTCCATCATCTGCAGGTCCAGAGTTTCCCAACAGTGGTGTCAATGCCACACAGCTTGATTCTTTAGGAGTTCATTCTCGAGGATCATTTGCCTCTCCATCTGGTCACAATCATCAGTTTGCATTTCAAAATCAACTGGACTCTGAAGAACCAGAAGATAACGGACTTAGCTCGACACACCAGGCTGCTGGTACTGCTCTAAGTGGTGGTACAGAGGCAGCTGTTGCTCGTGATGCTTTTGAAGGGATGATAGAGACTCTGTCAAGGACCAAGGAAAGTATTGGGCGCGCTACTCGTCTTGCAATTGATTGTGCCAAGTATGGAATCGCTAATGAGGTTGTGGATTTGCTTATTCGTAAGTTGGAAAACGAGTCGAGCTTTCACCGAAGAGTGGATCTGTTTTTTCTGGTGGATTCCATCACCCAATGTTCACATAGTCAAAAAGGCATTGCTGGGGCCTCATATATTCCTACTGTCCAAGCGGCATTGCCTCGCCTTTTAGGTGCAGCTGCTCCACCTGGAGCTAGTGCACGGGAAAATCGCCGTCAGTGCCTGAAGGTACTACGATTATGGCTTGAGAGAAAGATATTGCCTGAGTCAGTTCTTCGGCGCTATATGGATGATATTGGAGGGTCAAATGATGAACTAAGTAGTGGTTTGTCCCTGAGGCGGCCATCACGAGCTGAGCGTTCTGTGGATGACCCTATAAGAGAAATGGAAGGCATGTTTGTTGATGAGTATGGGAGTAATGCTACTTTCAATTTGCCTGGTTTTTTATCTACTCGAGGATTTGTTGATGATGATGAAGATGAGGATATTCCAAGTGCTTCTTGCAAATCTGATGCATTGACAGTTGATGTCTTAAATGCTCCCGAAGGAACCGAAACTGGTGAAGTTACCCCAATTGATAGGCGGCACCACATCTTAGAGGACGTGGATGTTGAACTTGAGATGGAAGATGTTTCTGGACATCTAAAGGATGGAGCTTTTTCTCCTGACAATTTCGCAGAGAAAAATAAACAAGAGATTGTCTTGGATGTAAAATTGGAGTCCTCTTCTCATAATATTGTGGAGCTGGAATTCCTTGAGGGTTCTCCACCGTTGCCTCTTGAACCTCCTCCGCCTCTACCTCCTCTGCCATCGTCACCTCCCCCGCCGCCCCCGCCTCTGTCATCGCCTTCACCGCCACCTCCGCCGCCAGAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52250.p1 GENE.S_Transcript_52250~~S_Transcript_52250.p1 ORF type:3prime_partial len:1151 (+),score=331.51,PWWP|PF00855.13|8.9e-17,CTK3|PF12243.4|1.3e+04,CTK3|PF12243.4|1.6e-08,CTD_bind|PF04818.9|2.5e-06 S_Transcript_52250:303-3752(+)
MAPWRKRGANNNNNNNKAAAQTAMEFSLGDLVLAKVKGFPPWPAQVSRPEDCGRTPDFKKYFVRFFGTQEIAFVAPADVQAFTVEARSKVLARCRGKTVKYFAQAVKEICEAFEELQQSDLNIVARQHYTADVEGEEIKGSEGHQDRECSNVGFDPASSRGESTLGSKPEKRAVNAEEVDQFPDYSEMFKKIVKDGTLAPKEGGTSTPSPTIPSSTKGDTNSTEIKADIVSFNECLQSSRTPSSSPYSGRPNGERDANHQKTGKKHNLAGASGQPKAPTGGDKKAANGHKSKELLVGSKRKLEGVVRHKDDAKSCGHVNDSLVEKVASGGNDKHLSPVANSSEPIPRGKALKNQLKDQKHLDVGKSPKDAVAIIREHGDSDHFINQKSGKFGLEQSQPVRKAKHVELTRDAAKGTILKNGKSDLESGIRDDESGLPLVKRQRALESMSDVKSPPEDKIIFGPATFKIDVPKKRRAVRLYDDDDGEPKTPVHGGSFKNSSVVNLDSARKTDENREISYRREENFKSSTGDRSGFKKDYTQKLVSESSVTAALQHKVDSSLKVQASHSPTIEDLDKPHLKEPNVDLFSPSKSPIVVSVANKLLDQQRPDRAPIKGSSGGSHSKAFNSSAKGANLVSSLNSSQSQVSTQKSRHFLSGERPRGTSKMSMRLNEPGASLDNQKEDSSMQDGRLEDAKERTGSLAEPKPGDASISMKHLIAAAQAKRRQAQMQNIGHGNENSVLAPAANIQVRSPSPSSAGPEFPNSGVNATQLDSLGVHSRGSFASPSGHNHQFAFQNQLDSEEPEDNGLSSTHQAAGTALSGGTEAAVARDAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVDLLIRKLENESSFHRRVDLFFLVDSITQCSHSQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKILPESVLRRYMDDIGGSNDELSSGLSLRRPSRAERSVDDPIREMEGMFVDEYGSNATFNLPGFLSTRGFVDDDEDEDIPSASCKSDALTVDVLNAPEGTETGEVTPIDRRHHILEDVDVELEMEDVSGHLKDGAFSPDNFAEKNKQEIVLDVKLESSSHNIVELEFLEGSPPLPLEPPPPLPPLPSSPPPPPPPLSSPSPPPPPPD

Click here to download the sequence:
Link to NCBI Protein BLAST