Transcript Information: S_Transcript_522525.p1


Annotated TAIR IDAT5G01010.2
Annotated Gene NameEXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: GOLD (InterPro:IPR009038); Has 85 Blast hits to 85 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 20; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1388-4924 | Reverse length=479
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.24415597463468
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.23139490279923


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_522525.p1 GENE.S_Transcript_522525~~S_Transcript_522525.p1 ORF type:internal len:109 (+),score=16.04,GOLD_2|PF13897.2|4.8,GOLD_2|PF13897.2|0.00035,EMP24_GP25L|PF01105.20|1.3e-06 S_Transcript_522525:3-326(+)
TCTGGTGGTGTTTTTGGAGATCTTCCAGACACTTGCTCTGTAGCCAATGTAAATGCCGGAAGCAATTTCGAAAAATCAGTCAAAATCGAAAAAGCCGATTCAGTGCTTAGTTATCGATTTAAAGTAGCTGAATACAATATTGGTTTTAGCATTGCTTTGGAAGAAAATGGAAAGAGAAAAGAGTTGGTAGCGTATAACAAATTTGAAAATGAACCTGTACAAGGAGAATTTACTGTTCCTGTTCCTGGAACCTATGTATTTATATGGGATAATTCATTTTCAATGTGGAGAAAGAAAGTTGTAAAGTATGAAGTAGAGGTTTTA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_522525.p1 GENE.S_Transcript_522525~~S_Transcript_522525.p1 ORF type:internal len:109 (+),score=16.04,GOLD_2|PF13897.2|4.8,GOLD_2|PF13897.2|0.00035,EMP24_GP25L|PF01105.20|1.3e-06 S_Transcript_522525:3-326(+)
SGGVFGDLPDTCSVANVNAGSNFEKSVKIEKADSVLSYRFKVAEYNIGFSIALEENGKRKELVAYNKFENEPVQGEFTVPVPGTYVFIWDNSFSMWRKKVVKYEVEVL

Click here to download the sequence:
Link to NCBI Protein BLAST