Transcript Information: S_Transcript_522539.p2


Annotated TAIR IDAT1G42470.1
Annotated Gene NamePatched family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:15926987-15935128 | Forward length=1272
E-Value2E-08
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.3285555708047
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10
Replicate 20.55960028583574
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_522539.p2 GENE.S_Transcript_522539~~S_Transcript_522539.p2 ORF type:internal len:81 (+),score=0.05,NPC1_N|PF16414.1|4.1e-11 S_Transcript_522539:2-241(+)
GCCGCCAACACGCGCTCCATGCTCTTCATCGGCAACGGCGCCAGCACCGCACAGGGCTTCCTGGATTTTCTGGGCACGGTCAAGGACAAAAGCATCACCCACCAGGGGTCCCCGATTCAGCTTGACTTCCCGCCAACAGCAGAGCCCAGCCAGGTGCCTGAGCACATCAAGCCGTGGAATGCCACGGTGCCCACCTGCTGGGACAACGCGCTGCGCTGCTCCTGCGGTGACTGCCCCCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_522539.p2 GENE.S_Transcript_522539~~S_Transcript_522539.p2 ORF type:internal len:81 (+),score=0.05,NPC1_N|PF16414.1|4.1e-11 S_Transcript_522539:2-241(+)
AANTRSMLFIGNGASTAQGFLDFLGTVKDKSITHQGSPIQLDFPPTAEPSQVPEHIKPWNATVPTCWDNALRCSCGDCPQ

Click here to download the sequence:
Link to NCBI Protein BLAST