Transcript Information: S_Transcript_522820.p1


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value1E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.35233683049345
Replicate 20
Replicate 30.20340358391223


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_522820.p1 GENE.S_Transcript_522820~~S_Transcript_522820.p1 ORF type:3prime_partial len:124 (+),score=19.11,zf-RVT|PF13966.2|3e-12,zf-RVT|PF13966.2|3.9e+03 S_Transcript_522820:332-700(+)
ATGCCTAAACATTCCATTATAACTGTGATGGCTATATCCAATGGACTTCCCACACAAGATAACTTCTCAAAGAGAGGGCTGCAGTTAGCAAACAGATGTGCCCTCTGCTGCTGTGAGCAGGAATCAGTGTGCCACTTATTCTTTGAGTGCTACTTTGCCAAGAAAGTCTTGGGAGATATTCTGAAGTGGCTAAAGCTAAAGAGGAGACCACTTAGTCTCAAAGGAGAACTAAAATGGTTTACAAAGCATGTCAAAGGCAGAAGTTGGATCAAAAAGCTGAGGAGATGTGCACTCATGACTACAGTCTATGAGCTATGGAGAGAGAGGAACTGCAGACTTTTCCAGTCCACAGAACACAGCATGAAGCAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_522820.p1 GENE.S_Transcript_522820~~S_Transcript_522820.p1 ORF type:3prime_partial len:124 (+),score=19.11,zf-RVT|PF13966.2|3e-12,zf-RVT|PF13966.2|3.9e+03 S_Transcript_522820:332-700(+)
MPKHSIITVMAISNGLPTQDNFSKRGLQLANRCALCCCEQESVCHLFFECYFAKKVLGDILKWLKLKRRPLSLKGELKWFTKHVKGRSWIKKLRRCALMTTVYELWRERNCRLFQSTEHSMKQ

Click here to download the sequence:
Link to NCBI Protein BLAST