Transcript Information: S_Transcript_52325.p1


Annotated TAIR IDAT5G58030.1
Annotated Gene NameTransport protein particle (TRAPP) component
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23487021-23488483 | Reverse length=195
E-Value3.7E-132
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 141.079555752766
Replicate 244.465006646684
Replicate 336.696315899677
Condition 2: 8 Hour
Replicate 152.493268472943
Replicate 255.528075598091
Replicate 348.971793471957
Condition 3: 24 Hour
Replicate 148.506843853473
Replicate 245.327623152695
Replicate 344.88230465936


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52325.p1 GENE.S_Transcript_52325~~S_Transcript_52325.p1 ORF type:complete len:195 (+),score=35.66,TRAPP|PF04051.12|2.5e-43 S_Transcript_52325:241-825(+)
ATGATTGGGGTAGGAAAGATCAAGCAATACTCTAATGTTCTTGACAAACCCCTTAGCAGGGGTAAACAAGAGGTAAGCTTAAGTGCTTTTGCATTCTTGTTCTCGGAGCTTGTTCAGTATAATCAGACCCAAGTTGACAATATTGCTGAACTTGAACGGAGGTTAGAGGATGCTGGGTATGCTGTTGGGGCACGAGTCCTGGAACTTCTTTGCCACAGGGAGAAGGGTAACAGAAGGGAGACACGTCTCTTGGGAATACTGTCTTTTGTGCACAGCACAGTGTGGAAGGTGTTGTTCGGGAAGGTGGCTGACTCACTAGAGAAAGGAACTGAACATGAAGATGAATATATGATCAGTGAGAAAGAGCTTTTGGTGAACAGGTTCATATCCATACCAAAAGATATGGGAACGTTCAATTGTGGGGCCTTTGTTGCTGGAATAGTGAGAGGCGTCTTGGACAGTGCAGGTTTTCCAGCTGTTGTAACGGCTCACTTTGTACCAGTGGAAGGGCAGTTGCGACCAAGGACTACTATCTTGATAAAATTCAGTGAAGAGGTACTAAAAAGGGAAGCAAGACTAGGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52325.p1 GENE.S_Transcript_52325~~S_Transcript_52325.p1 ORF type:complete len:195 (+),score=35.66,TRAPP|PF04051.12|2.5e-43 S_Transcript_52325:241-825(+)
MIGVGKIKQYSNVLDKPLSRGKQEVSLSAFAFLFSELVQYNQTQVDNIAELERRLEDAGYAVGARVLELLCHREKGNRRETRLLGILSFVHSTVWKVLFGKVADSLEKGTEHEDEYMISEKELLVNRFISIPKDMGTFNCGAFVAGIVRGVLDSAGFPAVVTAHFVPVEGQLRPRTTILIKFSEEVLKREARLG*

Click here to download the sequence:
Link to NCBI Protein BLAST