Transcript Information: S_Transcript_523326.p1


Annotated TAIR IDAT5G48930.1
Annotated Gene Namehydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase
Annotated Gene Symbol(s)HCT
Annotation TypeHomolog
Chromosome Positionchr5:19836654-19838092 | Reverse length=433
E-Value1E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.508324858456
Replicate 210.932012843814
Replicate 313.956665144346
Condition 2: 8 Hour
Replicate 16.3399809050936
Replicate 25.844897392361
Replicate 34.2247625883747
Condition 3: 24 Hour
Replicate 19.6432368562082
Replicate 211.229816546839
Replicate 317.041921895349


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_523326.p1 GENE.S_Transcript_523326~~S_Transcript_523326.p1 ORF type:internal len:111 (-),score=-1.68,Transferase|PF02458.11|1.6e-07 S_Transcript_523326:3-332(-)
AACTTTGTGTCGTTACCAGATGATTTGCAAACAGCGAGTATATCAGTGACATCGAGCCAACTTTCCAAAGATCAAATTGAGGCCATAAAACAAGAAGCCACATCGTGGAAGGAAACAAGTCAATATAAGGTAACAACATATGAGGTGTTAGCCGCTCACATATGGCGCAGCGCATGTAAAGCCCGTGGTCTAGCACCAGATCAAGAAGTTATGGCTTTCAGTGGGCCGGCCCAAGTGCCGGTACGGCAGGCCGAGGTGTCGACGTGGCACGGCACGAGCGGGCTGGGCTTGGAGTGGGCTGTGCCGGGGATTCGTTGTCGGGAGGCGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_523326.p1 GENE.S_Transcript_523326~~S_Transcript_523326.p1 ORF type:internal len:111 (-),score=-1.68,Transferase|PF02458.11|1.6e-07 S_Transcript_523326:3-332(-)
NFVSLPDDLQTASISVTSSQLSKDQIEAIKQEATSWKETSQYKVTTYEVLAAHIWRSACKARGLAPDQEVMAFSGPAQVPVRQAEVSTWHGTSGLGLEWAVPGIRCREAA

Click here to download the sequence:
Link to NCBI Protein BLAST