Transcript Information: S_Transcript_52348.p1


Annotated TAIR IDAT4G16340.1
Annotated Gene Nameguanyl-nucleotide exchange factors;GTPase binding;GTP binding
Annotated Gene Symbol(s)SPK1
Annotation TypeOrtholog
Chromosome Positionchr4:9228773-9241060 | Reverse length=1830
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.962099727607
Replicate 216.14991417529
Replicate 317.094728844139
Condition 2: 8 Hour
Replicate 120.424805344347
Replicate 219.682866291043
Replicate 321.281225221216
Condition 3: 24 Hour
Replicate 115.801171815611
Replicate 214.602022618221
Replicate 314.529645504626


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52348.p1 GENE.S_Transcript_52348~~S_Transcript_52348.p1 ORF type:complete len:1847 (+),score=369.15,DHR-2|PF06920.9|5.6e-152,DOCK-C2|PF14429.2|2.7e+03,DOCK-C2|PF14429.2|1.4e-29 S_Transcript_52348:390-5930(+)
ATGGATATGATGGAGAATTCATCAGCAAATGGGCAGAGGTTTCGGAGAATACCACGGCAGTCGTGGGCTGCTAATATGAAGCTAGACCCCTTGCTTGACGAGAACTTGGAACAATGGCCACATCTTAGCGAACTTGTTCAATGCTATAGAGCTGACTGGGTTAAAGATGATTATAAGTACGGGCATTATGAAAGCGTCGGTCCAACCACATTTGAAAATCAGATATATGAAGGGCCTGACACTGACATTGAAACAGAAATGAGACTTTCTGATGCTAGACAAACAAAAATTGAAGATGTTACAGATGAGGAGTTACCAAGCACATCAGGAAGACCATTTGGAGAGTTCGCCTTGTCTGACTCATCATTACCCAAAGCTTCAAAGCATCTTGGTTTATCGCCATTGTCTGCTTATGAACCTGCATTTGACTGGGAGAATGAGAGATCAATGGTGTTTGGTCAAAGACTTCCAGAAACTCATGTACCCTACGGAAGTGGATTGAAGATCTCGGTCAAGGTTCTTTCCTTGTCATTTCAAGCTGGACTAGTTGAGCCGTTCTATGGAACAATTTGCTTATATAACAGAGAAAGAAGAGATAAATTGTCCGAGGACTTTGTTTTCAGGGTTCTGCCTTCAGAAACAGAAAATGCTGGGATTTCAATTGAATCTCGTGCTATATTCTATTTAGATGCTCCGTCAGCATCAGTTTGTTTGTTGATTCAGTTAGAAAAGGCTGCCACTGAAGAAGGGGGCATCATATCCTCTGTCTATTCTCGAAAAGAGCCAGGTCAGCTCAGTGAGAGAGAAAGGCAGAAACTGCAGGTGTGGTCTCGAATTATGCCTTACAGAGAGTCATTTGCGTGGGCTATGGTGCCTTTATTTGACAACAACATTGGTGGAACCTCTGGTGGATCTGCTTCCCCTAATAGTCCCATCACACAAAGTGTTTCGGGTTCAAGTTTCCATGAAGGTGTATCTGATCCAACAACAAAGATAATGTTAGATGGAAAAATCGGTTATTCAAGTGGAAGCTCGGTCGTAGTTGAAATATCAAATCTAAATAAAGTAAAGGAGAGTTATACAGAGGACTCTTTGCAGGATCCTAAGCGAAAGGTGCATAAGCCTGTTAGAGGCTTGTTGAAGCTGGAGATTGAAAAGCTCCATGCTGGCAATCTTGACTACGAAAATGTTTCTGAGAGTGGCAGTATTAATGACACATTCGATATTGGGGAACGTATTCCTGATTCTTCATTGTCAAAAAATCCAAGTAATGGTTTTGATGGGTCCCAAGGCGGCAAATTGAGACACAGCCTTGTTGATGGAAAAGAATCTGGTCGAAATGGTTTAAAAGTCAGTGAGAGCTATGATTCCCATGCAGATGAATTTCATGCTTTTGATTTCCGTGCGACCACCAGGAATGAGCCGTTCTTGCATCTTTTCCACTGTCTCTATGTTTATCCGTTGACCGTAAGTTTGAGTAGAAAAAGGAATCTATTCATAAGAGTAGAACTTCGGAAGGATGACACTGAGATTCGCAGACAGCCACTAGAGGCAACATATCCAAGGGAGCCATTTGCATCAACTGAGAAATGGGCTCACACACAAGTTGCTGTTGGTGCAAGGGTTGCTTGCTATCATGATGAAGTTAAAGTCTCTCTACCGCCTATGTGGACTCCAGTCCATCATCTTTTGTTTACTTTCTTTCATGTTGACCTTCAAACAAAATTGGAATCTCCAAAGCCGGTGGTGATTGGCTATGCGGCTCTTCCACTGTCGACGTATGCTCAGTCACGATCTGAAATTTCGTTGCCTATCATGAGAGAGATTGTTCCGCATTATCTTCAAGATGCAGGGAAGGAGAGGCTTGACTATTTGGAGGACGGGAAGAATGTCTTCAGATTGCGGTTAAGATTATGCTCTTCCTTGTATCCTACGAACGAACGCATTAGAGATTTCTTTCTTGAGTATGATAGGCATACGCTTCGAACAAGCCCTCCTTGGGGATCAGAGCTTCTTGAGGCTATTAACAGTTTGAAGAATGTTGACTCTACCGCCCTGCTTCAGTTTCTTCATCCCGTATTGAACATGCTTCTTCACCTTATAGGGAATGGTGGTGAAACTCTTCAGGTTGCTGCCTTCAGAGCTATGGTTAACATCTTGACTCGGGTGCAGCAAGAGTCTGTCGATGATGCAGAGAGAAATCGGTTTCTAATTGCGTACGTGGATTATGCATTTGATGATTTTGGTGGTCGTCAATTGCCAGTCTATTCAGGTCTTTCTACTGTCTGGGGGAGCTTGGCACGTAGTAAGGCAAAAGGATATCGTGTTGGACCGGTATATGATGATGTATTGGCAATGTCTTGGTTTTTCCTTGAGCTTATTGTGAAGTCAATGGCTTTGGAGCAAATTCGTCTTTTTTACCACAGCCTTCCGTCAGGTGAAGATGTTCCACCAATGCAATTGAAAGAAGGTGTATTCAGGTGCATTATGCAGCTCTACGATTGTCTTATCACTGAAGTACATGAGCGGTGCAAGAAAGGATTGAGCTTAGCAAAACGTCTAAGTAGTAGTTTGGCATTCTTTTGTTATGACCTTTTGTCTGTTATTGAGCCTCGTCAAGTTTTCGAATTGGTATCCTTGTATCTGGATAAATTTTCTGGCTTATGCCAATCTGTTCTTCATGACTGCAAGCTTACATATTTACAAATCATATGTGATCATGATCTTTTCGTTGAAATGCCAGGACGAGATCCTTCAGATAGAAATTATCTTGCATCAGTGCTGATACAGGAACTTTTCCTCACTTTAGATCATGATGATTTGTCAAAGAAGTCAAAAGCAGCTAGAATCTTGGTTGTGCTCATGTGCAAGCATGAATTTGATTCTCGATACCAGAAGCCTGAAGATAAACTTTATATCGCACAGCTCTATTTTCCACTTATCAGCCAGATACTTGATGAAATGCCAGTCTTTTACAACCTTAGTGCTGCTGAAAAGCGTGAAGTCTTGATTGTTGTTTTGCAAATTGTACGCAATCTGGACGATTCATCACTCATAAAAGCTTGGCAGCAAAGCATTGCAAGGACGAGATTATTTTTTAAAGTTCTAGAAGAATGCCTAATTCTTTTTGAGCACAAAGGACCAAATGATAGTATGATTATTGGAAATAGTTCTCGTAGTATTGTTGGGGATGGACCTGCCTCTCCAAAGTACTCAGACAGGTTGTCTCCTGCAATTAACAATTATCTCTCAGAGGCATCACGCCAAGAGCCTCATAGAACACCAGAGAATTATTTGTGGCAGAGAGCAAACTCTCAGTTAAGCTCTCCAAGCCAACCTTACTCCTTACGAGAAGCTCTAGCTCAAGCGCAGGCATCTAGGATTGGGACGTCTGCCCAAGCACTGAGAGAATCATTGCATCCAATATTGAGACAAAAACTGGAACTTTGGGAGGAAAACTTGTGTGCTTCTGTCAGTCTTCAAGTACTAGAAATTTCTGAGAAGTTCTCCACAACTGCGGTGGCAAATGGCATTGCAACTGATTACGGAAAACTCGATTGCATTACTTCCATATTTACAAGCTTCTTCTCAAGGAATCAGCCACTTACTTTTTGGAAAGCTCTATTCCCAGTTTTCAATAATGTATTCAACTGTCATGGGTCAACGCTCATGTCACGTGAAAATGATCGTTTTCTCAAGCAAATGGCTTTTCATCTTCTTCGGCTTGCTGTTTATAGGAATGATAACATCCGAAGAAGGGCTGTAGTTGGTCTTCAGATTCTTGTCAGGAGCTCCTTCTGTTACTTCATGCACACAACAAGGCTCAGGGTCATGCTGACAATTACATTATCAGAGTTAATGTCTGATGTTCAAGTTACTCAGATGAAACCTGATGGAAGCCTTGAAGAGAGTGGTGAAGCACGTCGTTTGCGTAAATCTTTGGAGGAAATGACCGATGAAGTTACAAATCCCAATTTGTTAAGGGAGTGTGGTCTTCCTGAATGTGCACTGGTATCTGTCCCAGATAAATCTGCTGACTATCAGTGGTCTTGGTCAGAGGTTAAATATCTCTCTGACAGTCTTGTTTTGGCCCTTGATGCAAGCCTGGAACATGCACTTTTGCAGGCTCCTGTGATGAACATTGATAGATACGCTGCAGCAGAAAGTTTTCACAAGCTTGCAGTAGCATTTGCTCCAGTTCCAGACCTCCACATAATGTGGCTGCTCCATTTATGTGATGCACATCAGGAAATGCAATCCTGGGCGGAGGCTGCACAGTGTGCTGTTGCTGTTGCTGGTGTTGTTATGCAGGCTCTTGTTAGCAGAAATGATGGTGTCTGGAGCAAAGAGCATGTTGCTGCGCTGCGTAAAATATGCCCTATGGTCAACAATGAGATCAATTCTGAGGCATCTGCTGCCGAAGTAGAAGGATATGGTGCTTCAAAGCTAACTGTTGATTCTGCTGTGAAATACCTACAACTTGCCAACAAGCTCTTCTCTCAAGCAGAGCTCCATCATTTTTGTGCCAGCATTCTAGAATTAGTGATTCCCGTTTACAAGAGCAGAAGGGCTTATGGGCAGCTGGCCAAATGCCACACAATGCTGACAAGCATATATGAATCTATCCTTGAGCAAGAATCAAGCCCAATACCTTTCACAGATGCTACATATTATAGGGTGGGTTTCTATGGTGAGAAATTTGGGAAACTGGACAAAAAAGAATATGTGTACAGAGAGCCCCGTGATGTCCGGCTTGGTGACATCATGGAGAAACTTAGTCATATATATGAATCCAGAATGGATGGCAATCACCGGCTGCACATTATTCAAGATTCTAGACAAGTTAAGGCAGAGGAGTTGCAGCCAGGCGTTTGCTATCTGCAGATCACTGCTGTTGATCCTCTTATGGAAGATGAGGACCTGGGCAGCAGAAGGGAGAGAATTTTTTCTCTTTCAACTGGAAGTGTCCGTGCTCGCGTATTTGATCGCTTTTTATTTGACACCCCATTTACTAAAAACGGAAAGACGCAAGGTGGGTTGGAAGACCAGTGGAAGCGTCGAACAGTTCTTCAAACAGAAGGCTCATTCCCTGCCCTGGTTAATAGGCTTTTGGTGATAAAGTCTGAATCTATGGAGTTCTCACCCGTAGAGAATGCAATTGGAATGATTGAAACTCGGACAGCAGCACTACGAAATGAGCTTGAAGAGCCTCGAAGCTCTGAAGGGGACCAGTTGCCACGCCTCCAGAGCCTCCAGAGAATACTGCAAGGCAGTGTTGCAGTTCAAGTTAACAGTGGAGTTTTGAGTGTCTGTACTGCTTTCCTGTCAGGCGAGCCTGCTACAAGGCTTCGTTCACAGGAACTACAGCAACTCATTGCTGCACTCCTTGAATTCATGGCTGTTTGTAAGCGAGCAATTAGAGTACACTTTAGGCTGATTGGAGAGGAAGACCAGGAGTTCCACACTCAACTTGTAAATGGATTTCAATCGCTTACAGCTGAATTATCTCACTATATTCCTGCCATTCTCTCCGAGCTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52348.p1 GENE.S_Transcript_52348~~S_Transcript_52348.p1 ORF type:complete len:1847 (+),score=369.15,DHR-2|PF06920.9|5.6e-152,DOCK-C2|PF14429.2|2.7e+03,DOCK-C2|PF14429.2|1.4e-29 S_Transcript_52348:390-5930(+)
MDMMENSSANGQRFRRIPRQSWAANMKLDPLLDENLEQWPHLSELVQCYRADWVKDDYKYGHYESVGPTTFENQIYEGPDTDIETEMRLSDARQTKIEDVTDEELPSTSGRPFGEFALSDSSLPKASKHLGLSPLSAYEPAFDWENERSMVFGQRLPETHVPYGSGLKISVKVLSLSFQAGLVEPFYGTICLYNRERRDKLSEDFVFRVLPSETENAGISIESRAIFYLDAPSASVCLLIQLEKAATEEGGIISSVYSRKEPGQLSERERQKLQVWSRIMPYRESFAWAMVPLFDNNIGGTSGGSASPNSPITQSVSGSSFHEGVSDPTTKIMLDGKIGYSSGSSVVVEISNLNKVKESYTEDSLQDPKRKVHKPVRGLLKLEIEKLHAGNLDYENVSESGSINDTFDIGERIPDSSLSKNPSNGFDGSQGGKLRHSLVDGKESGRNGLKVSESYDSHADEFHAFDFRATTRNEPFLHLFHCLYVYPLTVSLSRKRNLFIRVELRKDDTEIRRQPLEATYPREPFASTEKWAHTQVAVGARVACYHDEVKVSLPPMWTPVHHLLFTFFHVDLQTKLESPKPVVIGYAALPLSTYAQSRSEISLPIMREIVPHYLQDAGKERLDYLEDGKNVFRLRLRLCSSLYPTNERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPVLNMLLHLIGNGGETLQVAAFRAMVNILTRVQQESVDDAERNRFLIAYVDYAFDDFGGRQLPVYSGLSTVWGSLARSKAKGYRVGPVYDDVLAMSWFFLELIVKSMALEQIRLFYHSLPSGEDVPPMQLKEGVFRCIMQLYDCLITEVHERCKKGLSLAKRLSSSLAFFCYDLLSVIEPRQVFELVSLYLDKFSGLCQSVLHDCKLTYLQIICDHDLFVEMPGRDPSDRNYLASVLIQELFLTLDHDDLSKKSKAARILVVLMCKHEFDSRYQKPEDKLYIAQLYFPLISQILDEMPVFYNLSAAEKREVLIVVLQIVRNLDDSSLIKAWQQSIARTRLFFKVLEECLILFEHKGPNDSMIIGNSSRSIVGDGPASPKYSDRLSPAINNYLSEASRQEPHRTPENYLWQRANSQLSSPSQPYSLREALAQAQASRIGTSAQALRESLHPILRQKLELWEENLCASVSLQVLEISEKFSTTAVANGIATDYGKLDCITSIFTSFFSRNQPLTFWKALFPVFNNVFNCHGSTLMSRENDRFLKQMAFHLLRLAVYRNDNIRRRAVVGLQILVRSSFCYFMHTTRLRVMLTITLSELMSDVQVTQMKPDGSLEESGEARRLRKSLEEMTDEVTNPNLLRECGLPECALVSVPDKSADYQWSWSEVKYLSDSLVLALDASLEHALLQAPVMNIDRYAAAESFHKLAVAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVSRNDGVWSKEHVAALRKICPMVNNEINSEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELHHFCASILELVIPVYKSRRAYGQLAKCHTMLTSIYESILEQESSPIPFTDATYYRVGFYGEKFGKLDKKEYVYREPRDVRLGDIMEKLSHIYESRMDGNHRLHIIQDSRQVKAEELQPGVCYLQITAVDPLMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKTQGGLEDQWKRRTVLQTEGSFPALVNRLLVIKSESMEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQEFHTQLVNGFQSLTAELSHYIPAILSEL*

Click here to download the sequence:
Link to NCBI Protein BLAST