Transcript Information: S_Transcript_5235.p1


Annotated TAIR IDAT1G80245.1
Annotated Gene NameSpc97 / Spc98 family of spindle pole body (SBP) component
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:30174547-30175217 | Forward length=127
E-Value3E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.1878218550028
Replicate 28.5361983407051
Replicate 37.2453606042717
Condition 2: 8 Hour
Replicate 15.458284426409
Replicate 25.1934648627937
Replicate 35.8364820823163
Condition 3: 24 Hour
Replicate 17.4116568985945
Replicate 27.0149892974409
Replicate 34.6540677176107


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_5235.p1 GENE.S_Transcript_5235~~S_Transcript_5235.p1 ORF type:complete len:168 (+),score=45.23 S_Transcript_5235:268-771(+)
ATGGATGATCCATCATTTAAATTTATAGGAGATAATAGTCCTGAAGATGTCAAATGGCTTTGTTCACTCTCCGAATCTGAGCTTGACCTCTTAATAAGCTTGAAGATGCTTGCCATTCAAAGAGCTAAAGTTGTTGGACATGAAAGTCTAGCCAAGAAATTTGATCTCAAAACACTTCGAGCCCTCGGGTTTGTTTTGATGCAACATGTGAAAGGACAGGTGGAAGAGTTGCAATTTGAAGGAGTTACTGGGTCAAAAGACTTTATGCGTGGCTGTAATCTTTTAGCGCTGGATCCAAAGGATAATGGTCATTCTATGGGAAATGAGGATCTAGCAACATTATTTGGGATGCATAATAAAAAGCAACCAGAAGCGAGATCCAGTGAGGTTGCTCCTGATTTAAAAGACAGAAAAATGAATGGTGAACTCTCAACTCCAAGACTGAAAAAATCAAGAAAGAGGCTTAGGGAAGAAAGGAAGGAAGGACAGAGCACAGGAAATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_5235.p1 GENE.S_Transcript_5235~~S_Transcript_5235.p1 ORF type:complete len:168 (+),score=45.23 S_Transcript_5235:268-771(+)
MDDPSFKFIGDNSPEDVKWLCSLSESELDLLISLKMLAIQRAKVVGHESLAKKFDLKTLRALGFVLMQHVKGQVEELQFEGVTGSKDFMRGCNLLALDPKDNGHSMGNEDLATLFGMHNKKQPEARSSEVAPDLKDRKMNGELSTPRLKKSRKRLREERKEGQSTGN*

Click here to download the sequence:
Link to NCBI Protein BLAST