Transcript Information: S_Transcript_52356.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeOrtholog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value1.5E-95
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1376.61429020695
Replicate 2319.84359164591
Replicate 3320.00941458999
Condition 2: 8 Hour
Replicate 1499.27262300051
Replicate 2495.43475714885
Replicate 3467.91515166814
Condition 3: 24 Hour
Replicate 1349.78292231606
Replicate 2358.08822290629
Replicate 3345.15985616213


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52356.p1 GENE.S_Transcript_52356~~S_Transcript_52356.p1 ORF type:complete len:165 (+),score=52.75,Skp1|PF01466.15|6.1e-43,Skp1_POZ|PF03931.11|2.1e-30 S_Transcript_52356:95-589(+)
ATGTCGAAGAAGGTGACACTCAAGAGCTCCGATGGCGAGACCTTCGAGGTGGATGAGGCTGTGGCTTTGGAGTCGCAAACAATCAAGCATATGATTGAAGATGACTGCGCCGACAACGCAATTCCTCTCCCCAACGTCACTGGAAAGATCCTTTCCAAGGTGATCGAGTACTGCAAGAGGCACGTTGAGGCTGCTGCTTCCAAGTCTTCTGTCACCGAGGATCGTTCTTCTTCTGCTTCTTCTGGTGCTGACGATGATATCAAGACTTGGGATGCTGAGTTCGTCAAAGTTGACCAGAATACCCTCTTCGATCTCATCTTGGCTGCTAACTACCTGAACATCAAGAGCCTGCTGGACTTGACATGCCAAGCTGTTGCTGATATGATCAAAGGGAAGACCCCAGAGGAGATCAGGAAGACCTTCAACATCAAGAATGACTTCACCCCAGAGGAGGAAGAGGAAGTTAGAAGGGAGAACCAGTGGGCCTTTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52356.p1 GENE.S_Transcript_52356~~S_Transcript_52356.p1 ORF type:complete len:165 (+),score=52.75,Skp1|PF01466.15|6.1e-43,Skp1_POZ|PF03931.11|2.1e-30 S_Transcript_52356:95-589(+)
MSKKVTLKSSDGETFEVDEAVALESQTIKHMIEDDCADNAIPLPNVTGKILSKVIEYCKRHVEAAASKSSVTEDRSSSASSGADDDIKTWDAEFVKVDQNTLFDLILAANYLNIKSLLDLTCQAVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE*

Click here to download the sequence:
Link to NCBI Protein BLAST