Transcript Information: S_Transcript_52359.p1


Annotated TAIR IDAT5G42190.1
Annotated Gene NameE3 ubiquitin ligase SCF complex subunit SKP1/ASK1 family protein
Annotated Gene Symbol(s)ASK2, SKP1B
Annotation TypeOrtholog
Chromosome Positionchr5:16854495-16855516 | Reverse length=171
E-Value3.4E-36
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.994094229711
Replicate 220.523525169781
Replicate 315.654880629103
Condition 2: 8 Hour
Replicate 127.772601343243
Replicate 224.713088613652
Replicate 319.580836753413
Condition 3: 24 Hour
Replicate 118.796760212837
Replicate 223.981475040089
Replicate 315.543818063618


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52359.p1 GENE.S_Transcript_52359~~S_Transcript_52359.p1 ORF type:5prime_partial len:86 (+),score=21.37,Skp1|PF01466.15|3.2e-32 S_Transcript_52359:1-258(+)
TGTTGCACGGGGACGGAAATGGAAACGGTTGTGTGTACGGAAACGGGGATGGGGAAACAGCAAAATCCAAAAATCAAGAAACGGGCTGCTAACTACCTGAACATCAAGAGCCTGCTGGACTTGACATGCCAAGCTGTTGCTGATATGATCAAAGGGAAGACCCCAGAGGAGATCAGGAAGACCTTCAACATCAAGAATGACTTCACCCCAGAGGAGGAAGAGGAAGTTAGAAGGGAGAACCAGTGGGCCTTTGAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52359.p1 GENE.S_Transcript_52359~~S_Transcript_52359.p1 ORF type:5prime_partial len:86 (+),score=21.37,Skp1|PF01466.15|3.2e-32 S_Transcript_52359:1-258(+)
CCTGTEMETVVCTETGMGKQQNPKIKKRAANYLNIKSLLDLTCQAVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE*

Click here to download the sequence:
Link to NCBI Protein BLAST