Transcript Information: S_Transcript_52363.p1


Annotated TAIR IDAT1G66150.1
Annotated Gene Nametransmembrane kinase 1
Annotated Gene Symbol(s)TMK1
Annotation TypeOrtholog
Chromosome Positionchr1:24631503-24634415 | Forward length=942
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.025332438189
Replicate 242.200014937034
Replicate 355.677282119892
Condition 2: 8 Hour
Replicate 139.511396150146
Replicate 245.190663761214
Replicate 336.535048996971
Condition 3: 24 Hour
Replicate 121.821913055799
Replicate 221.376907448984
Replicate 322.092495257058


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52363.p1 GENE.S_Transcript_52363~~S_Transcript_52363.p1 ORF type:complete len:951 (+),score=217.79,Pkinase|PF00069.21|5.2e-47,Pkinase_Tyr|PF07714.13|3.7e-46,LRR_8|PF13855.2|0.22,LRR_8|PF13855.2|3e-06,LRR_8|PF13855.2|5.6e+02,LRR_8|PF13855.2|5.2e+02,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|3.8e-07,LRR_4|PF12799.3|6.6,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|8.2e+03,LRR_4|PF12799.3|30,LRR_4|PF12799.3|0.0022,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|2.9e-05,LRRNT_2|PF08263.8|7.2e-06,LRRNT_2|PF08263.8|0.0018,LRRNT_2|PF08263.8|5.9e+03,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|20,LRR_1|PF00560.29|8.7,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|4.7e+03,LRR_1|PF00560.29|34,LRR_1|PF00560.29|9.8e+02,LRR_1|PF00560.29|31,LRR_1|PF00560.29|13 S_Transcript_52363:288-3140(+)
ATGAAGAAAAGAAACAGTTATTGCCCATATGGGCACTTATATTTGCTCATTTTAGCACTTGGGTTATCTTCATTTTGCTTGAATGTTGTACCGTCACAAGATGATGATGACAGTTCAGTGATGTTAGCTCTCAAGAAGAGCTTGAACCCACCTGAAGCACTTGGATGGACTGACCCAGATCCATGTAAGTGGAACCATATTGTTTGTTCTCAGGATAAGAGAGTGACCCGGATCCAGATTGGTCACCAGAATCTTCAAGGTACTCTCCCACCTAATCTCTCTTCTTTGTCTGAGCTTGAAAGATTAGAGCTTCAATGGAATAATATATCTGGTCCTCTTCCTAGCTTAAGTGGGTTGAGCTCTTTGCAAGTTTTAATGCTTAATAACAACCAGTTTAGTTCAATTCCTAGTGATTTCTTTGATGGGATGACCTCACTTCAGTCTGTTGAGATTGATAATAACCCCTTTGAGGGATGGCAAATTCCTGATTCTCTTAAAAGTGCTTCAACTCTTCAGAATTTCTCTGCTAATTCTGCTAATTTGATTGGTAAGATACCTCATTTCTTTGGGCCTGATACTTTTCCTGGTATGGTTAACTTGCGCTTGGCATTTAATAGCTTGGAGGGTGAGTTGCCTGGGAGTTTTGATGGGTTTCAGATTCAGTCATTTTGGGTTAATGGTCAGAAAAGTGATGCTAAACTTGGGGGGAGGATTGATGTGATTCAAAACATGACTTCTTTGAAAGAGATTTGGTTGCATCAGAATGCATTTACTGGTCCTTTGCCTGATTTTTCTGGCCTGAAAGATTTACAGACCTTGAGCCTTAGAGATAACAAGTTTACTGGGGTTGTGCCATTGTCTTTGATGAATTTGGAGTCACTGGCTGTTGTGAACTTGACTAATAATCTGTTTCAAGGGCCATGGCCTGTGTTCAAGAGCTCGTTTATCGTTGATTCGACTGAGGATACAAACAGTTTTTGCTTGCCTAAGCCTGGTGATTGTAGTCCTCAAGTGAATACACTGCTTTCTGTTGCTAAATCTATGGAGTATCCTATAAGATTAGCTCAAAGTTGGAAGGGGAACGATGTGTGTGCTGATTGGCTTGGTATCACTTGTACCAATGGTAACATTACTACTGTTAATTTGGAGAAAAAGGGTCTTAATGGAACAATATCTCCTGATTTTGCATCCGTTAAGTCACTCCAAAGGCTGATTCTGGCAAATAATAATCTCACTGGTACTATTCCTGAGGAGCTTACAACTTTGCCATCCCTTACTCAGTTAGATTTGTCAAATAATCAGCTTTATGGAAAAGTACCATCCTTTAAGAAGGGTTTGACTTTAAATACACATGGTAATGTTGATATTGGAAAGGATGCGAGTGAGATAGCACATGGTCGCGGATCATCTTCATCATCAGGCACAGCTGATGGAAGTGATGGAGCTTCTGGCAATAAGTCTAAACTGTCTACTGGTGCTATCGTTGCTATCTGTGTGGTTGGGGCTGTTCTTTTGTTGCTTGTATGTGGGTTGGTCGGATTTTGTGTCTACAAAAAGAAGCAAAAGAAGTTTACCAGAGTGCAGAGCCCAAATGCAATGGTTGTCCATCCCCGTCATTCTGGTTCTGACAATGAAAATGTTAAGATCACAGTGGCAGGATCAAGTGTCGATGTTGGACAAGTTAGCGAGACTCATACCATTCCTGGCAGTGAAACAGGTGACATCCAAATGGCTGAGAATGGAAACATGGTTATTTCCATCCAAGTCCTAAGAAATGTGACTAACAATTTCAGTGAGAAGAACATTCTGGGACAAGGAGGTTTTGGGACAGTTTACAAAGGAGAATTGCATGATGGGACAAAGATTGCAGTCAAGAGAATGGAATCTGGGGTGATCGCAGGGAAAGGATTGGCTGAGTTCAAGTCTGAAATTGCAGTGTTGACCAAGGTTCGCCACCGGCATTTGGTTGCACTTCTTGGGTACTGTTTGGATGGGAATGAGAAGCTCCTAGTGTATGAGTACATGCCTCAGGGAACTTTAAGTCAGCATCTATTTAGTTGGGCTGATGAAGGGTTAAAACCTCTTGAATGGACCAGGAGGTTGAGCATTGCCTTGGATGTGGCAAGGGGTGTTGAGTATCTACATGGGTTGGCTCATCAAAGTTTTATTCACAGGGACTTGAAACCTTCTAATATCCTTCTAGGGGATGATATGAGAGCAAAGGTTGCAGATTTCGGTCTTGTACGTTTGGCTCCTGAAGGGAAAGCCTCAATTGAAACTAGGATTGCCGGAACCTTTGGGTATTTGGCCCCTGAATATGCAGTGACAGGACGAGTAACCACCAAAGTTGATGTATTCAGCTTCGGAGTAATCCTCATGGAGTTGATAACAGGAAGGAAAGCTCTGGATGAGACTCAACCCGAGGAGAGCATGCACCTCGTGACATGGTTCAAGAGGATGCACATCAACAAGGAGACATTCCGCAAGGCCATTGACCCCACCATTGATCTTGATGAGGAAACCCTTGCCAGCATCAGCACCGTTGCTGAGCTGGCAGGGCACTGCTGTGCAAGGGAGCCATATCAGAGGCCGGACATGGGCCACGCTGTCAATGTCTTATCTTCTCTAGTCGAGCTTTGGAAGCCGGCAGAGGTCAATTTCGATGACTGTTATGGTATTGATCTTGACATGTCTTTACCTCAGGCCTTGAAGAAATGGAAGGATTCTGAAGGAACTAGCCAGATGGACACTTCATCATCGTCCTTTGTTCGTAGTGTTGATAATACTCAAACTAGCATGGTTGCTCGGCCGTATGGCTTTGCTGAGTCCTTCACATCAGCTGACGGACGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52363.p1 GENE.S_Transcript_52363~~S_Transcript_52363.p1 ORF type:complete len:951 (+),score=217.79,Pkinase|PF00069.21|5.2e-47,Pkinase_Tyr|PF07714.13|3.7e-46,LRR_8|PF13855.2|0.22,LRR_8|PF13855.2|3e-06,LRR_8|PF13855.2|5.6e+02,LRR_8|PF13855.2|5.2e+02,LRR_8|PF13855.2|0.00036,LRR_8|PF13855.2|3.8e-07,LRR_4|PF12799.3|6.6,LRR_4|PF12799.3|0.0012,LRR_4|PF12799.3|8.2e+03,LRR_4|PF12799.3|30,LRR_4|PF12799.3|0.0022,LRR_4|PF12799.3|0.0057,LRR_4|PF12799.3|2.9e-05,LRRNT_2|PF08263.8|7.2e-06,LRRNT_2|PF08263.8|0.0018,LRRNT_2|PF08263.8|5.9e+03,LRR_1|PF00560.29|4.2e+03,LRR_1|PF00560.29|20,LRR_1|PF00560.29|8.7,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|3.3e+02,LRR_1|PF00560.29|4.7e+03,LRR_1|PF00560.29|34,LRR_1|PF00560.29|9.8e+02,LRR_1|PF00560.29|31,LRR_1|PF00560.29|13 S_Transcript_52363:288-3140(+)
MKKRNSYCPYGHLYLLILALGLSSFCLNVVPSQDDDDSSVMLALKKSLNPPEALGWTDPDPCKWNHIVCSQDKRVTRIQIGHQNLQGTLPPNLSSLSELERLELQWNNISGPLPSLSGLSSLQVLMLNNNQFSSIPSDFFDGMTSLQSVEIDNNPFEGWQIPDSLKSASTLQNFSANSANLIGKIPHFFGPDTFPGMVNLRLAFNSLEGELPGSFDGFQIQSFWVNGQKSDAKLGGRIDVIQNMTSLKEIWLHQNAFTGPLPDFSGLKDLQTLSLRDNKFTGVVPLSLMNLESLAVVNLTNNLFQGPWPVFKSSFIVDSTEDTNSFCLPKPGDCSPQVNTLLSVAKSMEYPIRLAQSWKGNDVCADWLGITCTNGNITTVNLEKKGLNGTISPDFASVKSLQRLILANNNLTGTIPEELTTLPSLTQLDLSNNQLYGKVPSFKKGLTLNTHGNVDIGKDASEIAHGRGSSSSSGTADGSDGASGNKSKLSTGAIVAICVVGAVLLLLVCGLVGFCVYKKKQKKFTRVQSPNAMVVHPRHSGSDNENVKITVAGSSVDVGQVSETHTIPGSETGDIQMAENGNMVISIQVLRNVTNNFSEKNILGQGGFGTVYKGELHDGTKIAVKRMESGVIAGKGLAEFKSEIAVLTKVRHRHLVALLGYCLDGNEKLLVYEYMPQGTLSQHLFSWADEGLKPLEWTRRLSIALDVARGVEYLHGLAHQSFIHRDLKPSNILLGDDMRAKVADFGLVRLAPEGKASIETRIAGTFGYLAPEYAVTGRVTTKVDVFSFGVILMELITGRKALDETQPEESMHLVTWFKRMHINKETFRKAIDPTIDLDEETLASISTVAELAGHCCAREPYQRPDMGHAVNVLSSLVELWKPAEVNFDDCYGIDLDMSLPQALKKWKDSEGTSQMDTSSSSFVRSVDNTQTSMVARPYGFAESFTSADGR*

Click here to download the sequence:
Link to NCBI Protein BLAST