Transcript Information: S_Transcript_52438.p1


Annotated TAIR IDAT3G05410.2
Annotated Gene NamePhotosystem II reaction center PsbP family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:1554783-1561456 | Forward length=280
E-Value5.6E-113
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.909800505461
Replicate 222.554896387794
Replicate 329.275272519321
Condition 2: 8 Hour
Replicate 17.3727185854772
Replicate 25.821670649743
Replicate 35.7845980489355
Condition 3: 24 Hour
Replicate 125.742855265868
Replicate 222.832315751636
Replicate 325.409568898834


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52438.p1 GENE.S_Transcript_52438~~S_Transcript_52438.p1 ORF type:complete len:269 (+),score=32.41,PsbP|PF01789.12|2.4,PsbP|PF01789.12|5.8e-17 S_Transcript_52438:384-1190(+)
ATGGCATTACAACACCACTGTTACTACCTAGCATCAAAATCAACCAAATTTCACCCAATATATCTTACACAATCCTCTGGTGAACGGAACAGTGAGAGTCAGTATAGAAAACCACCGGCGGAGCAATTTGCACCACTAGCATCAACGTTTCAACGACGGGTCTTACTAGGAATCGGGTCAGCCTCTGTGGTGGCTCTGGGTGCCAATTTCACCGGGGTCACAAGCTTTCTCTTAGGACTTTCACCAGAAACCGGTCGAGGCCTCAAACTGGACGTGCTTTATCCGATAGGAGGGTATAGTCGCTGCATTGAACCAAAAGAAGGATTTGAGTTCATATACCCTGCAACATGGGTTGCAGACCAGAGGCTACTATATCGTGCAGCCGAACGAGCTGAACGGGAGAGATCACTTGATCCTCCTCCTCTCAACTCCAGTACCCGGCGTCAAAGAAATGTGAATGAACCAACCATTGGCTTTGGTCCTCCTGGCCCGACTGGCGAGCTTAACGTCAGTGTGATTGTTTCACCAGTCCCACTTGATTTCAGGATCAAAGCATTTGGTGGGCCAAAAGAGGTAGGGGACCTTCTGATTAGAACAATAACAGGCTCCAGCTGCAGTCCAGATGTGGAGGCTATGCTGTTAAGATCAAACATGAGAGAGGATTCACTAAGGAATGTTAATTATTATGAGTTGGAATTTAGGGTTGATAGCACCTCATTCCACCGCCACAATGTTGCTGTTTGTTGTGCTGAAAAGGGAAGGCTTTATACACTGAATGCCCAAGCTCCAGAGAATGGCAACGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52438.p1 GENE.S_Transcript_52438~~S_Transcript_52438.p1 ORF type:complete len:269 (+),score=32.41,PsbP|PF01789.12|2.4,PsbP|PF01789.12|5.8e-17 S_Transcript_52438:384-1190(+)
MALQHHCYYLASKSTKFHPIYLTQSSGERNSESQYRKPPAEQFAPLASTFQRRVLLGIGSASVVALGANFTGVTSFLLGLSPETGRGLKLDVLYPIGGYSRCIEPKEGFEFIYPATWVADQRLLYRAAERAERERSLDPPPLNSSTRRQRNVNEPTIGFGPPGPTGELNVSVIVSPVPLDFRIKAFGGPKEVGDLLIRTITGSSCSPDVEAMLLRSNMREDSLRNVNYYELEFRVDSTSFHRHNVAVCCAEKGRLYTLNAQAPENGNG*

Click here to download the sequence:
Link to NCBI Protein BLAST