Transcript Information: S_Transcript_52467.p1


Annotated TAIR IDAT2G39090.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)APC7, AtAPC7
Annotation TypeOrtholog
Chromosome Positionchr2:16312771-16317233 | Reverse length=558
E-Value4.7E-286
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 115.058602122398
Replicate 219.236240005662
Replicate 322.807298181677
Condition 2: 8 Hour
Replicate 124.968161616857
Replicate 222.252425960155
Replicate 326.284488238883
Condition 3: 24 Hour
Replicate 117.996763445098
Replicate 219.115029692506
Replicate 320.240466239693


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52467.p1 GENE.S_Transcript_52467~~S_Transcript_52467.p1 ORF type:complete len:562 (+),score=138.30,TPR_11|PF13414.2|0.00028,TPR_11|PF13414.2|82,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|1.3,TPR_11|PF13414.2|0.00034,TPR_11|PF13414.2|0.0053,TPR_11|PF13414.2|0.17,TPR_2|PF07719.13|0.0078,TPR_2|PF07719.13|3.6e+03,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.74,TPR_2|PF07719.13|3.3,TPR_2|PF07719.13|1e+02,TPR_2|PF07719.13|0.067,TPR_2|PF07719.13|4.3e+02,TPR_2|PF07719.13|2.3,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.00058,TPR_16|PF13432.2|1.7,TPR_16|PF13432.2|4.4e+03,TPR_16|PF13432.2|8e+02,TPR_16|PF13432.2|0.003,TPR_16|PF13432.2|2.6,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|8.8,TPR_16|PF13432.2|0.00021,TPR_16|PF13432.2|0.23,TPR_14|PF13428.2|2.4,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|0.16,TPR_14|PF13428.2|21,TPR_14|PF13428.2|55,TPR_14|PF13428.2|16,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|5.6,TPR_14|PF13428.2|0.15,TPR_14|PF13428.2|0.022,TPR_1|PF00515.24|0.029,TPR_1|PF00515.24|7.1e+03,TPR_1|PF00515.24|29,TPR_1|PF00515.24|47,TPR_1|PF00515.24|0.31,TPR_1|PF00515.24|5.1e+02,TPR_1|PF00515.24|0.026,TPR_1|PF00515.24|3.4,TPR_1|PF00515.24|0.0022,TPR_8|PF13181.2|0.23,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|0.13,TPR_8|PF13181.2|8.1e+03,TPR_8|PF13181.2|4.5,TPR_8|PF13181.2|28,TPR_8|PF13181.2|4.3,TPR_8|PF13181.2|1.3e+04,TPR_8|PF13181.2|16,TPR_8|PF13181.2|0.021,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|28,TPR_19|PF14559.2|0.039,TPR_19|PF14559.2|1,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|1.9e-05,TPR_19|PF14559.2|0.18,TPR_12|PF13424.2|0.03,TPR_12|PF13424.2|1.3e+04,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|0.025,TPR_12|PF13424.2|0.062,TPR_12|PF13424.2|0.27,TPR_12|PF13424.2|0.093,TPR_12|PF13424.2|0.71,TPR_12|PF13424.2|0.03,TPR_7|PF13176.2|7.6e-05,TPR_7|PF13176.2|2.3e+03,TPR_7|PF13176.2|7.1,TPR_7|PF13176.2|1e+04,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|55,TPR_7|PF13176.2|0.55,TPR_17|PF13431.2|3.8e+02,TPR_17|PF13431.2|9.3e+02,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|2.9e+02,TPR_17|PF13431.2|31,TPR_17|PF13431.2|74,TPR_17|PF13431.2|1.2e+03,TPR_17|PF13431.2|5.8e+02,TPR_6|PF13174.2|2.3,TPR_6|PF13174.2|9.8e+02,TPR_6|PF13174.2|13,TPR_6|PF13174.2|2.9,TPR_6|PF13174.2|6.7e+03,TPR_6|PF13174.2|2.1e+03,TPR_6|PF13174.2|5.9e+02,TPR_6|PF13174.2|1.4e+02,TPR_6|PF13174.2|91,ANAPC3|PF12895.3|0.07,ANAPC3|PF12895.3|1.1,ANAPC3|PF12895.3|3,ANAPC3|PF12895.3|1.9,ANAPC3|PF12895.3|7.9,ANAPC3|PF12895.3|62 S_Transcript_52467:176-1861(+)
ATGGACGTTCCAAAAGACCATATGTCTACTCTCCTCGATCATGGTCTTTACAATTCAGCTAAACTTCTGGGGTATTTCCTTGTTTCTTTGTCTTCTTTAAATGCCGAAACTAATCCCAATGCCAAGGCCGAAAGTTTGGTGCTTCTTGGAGATGCATTGTTTCGGGAAAGGGAATATCGGCGAGCGATTAGTACATATAAACAGGCCTTGCAATTTCACAAGATCATCCCAAAGCAAAGCACTCCTACACTAAGAAGTTCATTGTCTACACCAAGCAGGTCTTCTTCTCCAAGTTCTGTTAATATTTCAGCGATTAATGAAAATGAGGTCAAATTCAAAATTGCATCCTGTCATGCTGCGCTGAATGAGAACAAAGCTGCTATCTTGGAGATGGAGGGAATCCCTAGCAAGTTAAGAAATTTGCCGATGCATCTAATGATGGGAAAGCTTTATCGAAATACTCGACATACTCGTGCGGCTGCTGCGAGTTACAAAGAGTGTTTGAGACATTGTCCCTATATCCTCGAGGCTATAAGTGCTCTGGCTGAGCTTGGAGCTTCTGTTAAGGAAATTATTTCCTTGTTTCCTCAGATACTAAGTAGAAGCACGAGGCCTCTCTCTGATCATCTTGAATCTGGCCGCTGGCTACAGCGTTATGTTGAGGCCCAGTGTTGTCTTGCATCAAATGATTACAAAGGTGGGTTAGAAATGTTCACAGAACTTTTACAGAGGTTCCCGAATAATGTGCAATTATTACTTGAAATTGCAAAGGTTGAGGCCATAATTGGAAAAAATGACGAAGCTATAGTGAACTTCGAGAAGGCACGTTCTATTGATCCATATATGGTTACATATATGGATGAGTATGCAATGCTTCTCAAGAATAAATCTGATTATGGAAAGCTAAACAAATTGGTGCATGACTTGTTGAACATTGATCCTACAAGACCAGAAGTATTCGTTGCTTTGTCAGTGTTGTGGCAAAGAAAAGATGAGAGAGGAGCTCTGTCTTATGCAGAAAAGAGTATTCAAATTGATGAAAGGCACGTAACTGGTCATATCATGAAGGGAAACTTGCTTTTGTTACTGAATAGACCAGATGCAGCCGCTGGTGCCTTCAGAAATGCTCAGGAACTTAAACCTGATCTTCGTTCTTATCAAGGCTTAGTTCATTCCTATTTGGCAATTTCGAAGGTCAAAGAAGCTTTATATATTGCCAGAGAGGCAATGAAGATAATGCCTCAATCTGCAAAGGCTTTGAAGTTAGTTGGAGATGTGCATGCTAAAAGTACCAGTGGGAGGGAAAAGGCAAAGAAGTTCTATGAATCTGCTCTCAGATTGGAACCTGGTTACCTTGGGGCTGCATTGGCACTTGCTGAACTTCATGTAGTCGAGGGTCGAAATGGTGATGCTGTATCTCTTCTTGAGCGTTACCTTAAAGATTGGGCTGATGATTCTCTCCACGTCAAGCTTGCTCAAGTTTTCGCTGCCACTAATATGTTGCAGGAGGCATTGTCTCATTATCAGGCTGCATTGAGGATGAACCCACAGAATGAAGCTGCAAAGAAAGGGTTAGAGCGTTTGGAGAAACAAATGAAGGGAGTTGATCCAGATGCACCTGATGAAGATGAAGAGACTGAGGTTGATGATGGTGATGGGGACCAGGAGGAAACGGAGCTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52467.p1 GENE.S_Transcript_52467~~S_Transcript_52467.p1 ORF type:complete len:562 (+),score=138.30,TPR_11|PF13414.2|0.00028,TPR_11|PF13414.2|82,TPR_11|PF13414.2|1.4e-05,TPR_11|PF13414.2|1.3,TPR_11|PF13414.2|0.00034,TPR_11|PF13414.2|0.0053,TPR_11|PF13414.2|0.17,TPR_2|PF07719.13|0.0078,TPR_2|PF07719.13|3.6e+03,TPR_2|PF07719.13|1.1,TPR_2|PF07719.13|0.74,TPR_2|PF07719.13|3.3,TPR_2|PF07719.13|1e+02,TPR_2|PF07719.13|0.067,TPR_2|PF07719.13|4.3e+02,TPR_2|PF07719.13|2.3,TPR_2|PF07719.13|3.3e+03,TPR_2|PF07719.13|0.00058,TPR_16|PF13432.2|1.7,TPR_16|PF13432.2|4.4e+03,TPR_16|PF13432.2|8e+02,TPR_16|PF13432.2|0.003,TPR_16|PF13432.2|2.6,TPR_16|PF13432.2|0.012,TPR_16|PF13432.2|8.8,TPR_16|PF13432.2|0.00021,TPR_16|PF13432.2|0.23,TPR_14|PF13428.2|2.4,TPR_14|PF13428.2|0.11,TPR_14|PF13428.2|0.16,TPR_14|PF13428.2|21,TPR_14|PF13428.2|55,TPR_14|PF13428.2|16,TPR_14|PF13428.2|3.1e+03,TPR_14|PF13428.2|5.6,TPR_14|PF13428.2|0.15,TPR_14|PF13428.2|0.022,TPR_1|PF00515.24|0.029,TPR_1|PF00515.24|7.1e+03,TPR_1|PF00515.24|29,TPR_1|PF00515.24|47,TPR_1|PF00515.24|0.31,TPR_1|PF00515.24|5.1e+02,TPR_1|PF00515.24|0.026,TPR_1|PF00515.24|3.4,TPR_1|PF00515.24|0.0022,TPR_8|PF13181.2|0.23,TPR_8|PF13181.2|2.3e+03,TPR_8|PF13181.2|0.13,TPR_8|PF13181.2|8.1e+03,TPR_8|PF13181.2|4.5,TPR_8|PF13181.2|28,TPR_8|PF13181.2|4.3,TPR_8|PF13181.2|1.3e+04,TPR_8|PF13181.2|16,TPR_8|PF13181.2|0.021,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|28,TPR_19|PF14559.2|0.039,TPR_19|PF14559.2|1,TPR_19|PF14559.2|1.3e+02,TPR_19|PF14559.2|1.9e-05,TPR_19|PF14559.2|0.18,TPR_12|PF13424.2|0.03,TPR_12|PF13424.2|1.3e+04,TPR_12|PF13424.2|3.1e+02,TPR_12|PF13424.2|0.025,TPR_12|PF13424.2|0.062,TPR_12|PF13424.2|0.27,TPR_12|PF13424.2|0.093,TPR_12|PF13424.2|0.71,TPR_12|PF13424.2|0.03,TPR_7|PF13176.2|7.6e-05,TPR_7|PF13176.2|2.3e+03,TPR_7|PF13176.2|7.1,TPR_7|PF13176.2|1e+04,TPR_7|PF13176.2|1.6e+02,TPR_7|PF13176.2|55,TPR_7|PF13176.2|0.55,TPR_17|PF13431.2|3.8e+02,TPR_17|PF13431.2|9.3e+02,TPR_17|PF13431.2|0.13,TPR_17|PF13431.2|2.9e+02,TPR_17|PF13431.2|31,TPR_17|PF13431.2|74,TPR_17|PF13431.2|1.2e+03,TPR_17|PF13431.2|5.8e+02,TPR_6|PF13174.2|2.3,TPR_6|PF13174.2|9.8e+02,TPR_6|PF13174.2|13,TPR_6|PF13174.2|2.9,TPR_6|PF13174.2|6.7e+03,TPR_6|PF13174.2|2.1e+03,TPR_6|PF13174.2|5.9e+02,TPR_6|PF13174.2|1.4e+02,TPR_6|PF13174.2|91,ANAPC3|PF12895.3|0.07,ANAPC3|PF12895.3|1.1,ANAPC3|PF12895.3|3,ANAPC3|PF12895.3|1.9,ANAPC3|PF12895.3|7.9,ANAPC3|PF12895.3|62 S_Transcript_52467:176-1861(+)
MDVPKDHMSTLLDHGLYNSAKLLGYFLVSLSSLNAETNPNAKAESLVLLGDALFREREYRRAISTYKQALQFHKIIPKQSTPTLRSSLSTPSRSSSPSSVNISAINENEVKFKIASCHAALNENKAAILEMEGIPSKLRNLPMHLMMGKLYRNTRHTRAAAASYKECLRHCPYILEAISALAELGASVKEIISLFPQILSRSTRPLSDHLESGRWLQRYVEAQCCLASNDYKGGLEMFTELLQRFPNNVQLLLEIAKVEAIIGKNDEAIVNFEKARSIDPYMVTYMDEYAMLLKNKSDYGKLNKLVHDLLNIDPTRPEVFVALSVLWQRKDERGALSYAEKSIQIDERHVTGHIMKGNLLLLLNRPDAAAGAFRNAQELKPDLRSYQGLVHSYLAISKVKEALYIAREAMKIMPQSAKALKLVGDVHAKSTSGREKAKKFYESALRLEPGYLGAALALAELHVVEGRNGDAVSLLERYLKDWADDSLHVKLAQVFAATNMLQEALSHYQAALRMNPQNEAAKKGLERLEKQMKGVDPDAPDEDEETEVDDGDGDQEETELL*

Click here to download the sequence:
Link to NCBI Protein BLAST