Transcript Information: S_Transcript_52468.p1


Annotated TAIR IDAT2G39090.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)APC7, AtAPC7
Annotation TypeOrtholog
Chromosome Positionchr2:16312771-16317233 | Reverse length=558
E-Value2.8E-187
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.187761313959
Replicate 210.210877811742
Replicate 39.8056420499584
Condition 2: 8 Hour
Replicate 119.092980311483
Replicate 219.043805040428
Replicate 39.8651856684211
Condition 3: 24 Hour
Replicate 113.179144585234
Replicate 210.301732534703
Replicate 310.14440353484


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52468.p1 GENE.S_Transcript_52468~~S_Transcript_52468.p1 ORF type:complete len:363 (+),score=109.94,TPR_11|PF13414.2|0.015,TPR_11|PF13414.2|0.69,TPR_11|PF13414.2|0.00018,TPR_11|PF13414.2|0.0028,TPR_11|PF13414.2|0.096,TPR_2|PF07719.13|1.7e+03,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|60,TPR_2|PF07719.13|0.038,TPR_2|PF07719.13|2.5e+02,TPR_2|PF07719.13|1.3,TPR_2|PF07719.13|1.9e+03,TPR_2|PF07719.13|0.00033,TPR_16|PF13432.2|0.062,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|0.0063,TPR_16|PF13432.2|4.9,TPR_16|PF13432.2|0.00011,TPR_16|PF13432.2|0.11,TPR_1|PF00515.24|0.18,TPR_1|PF00515.24|3e+02,TPR_1|PF00515.24|0.015,TPR_1|PF00515.24|6.3e+03,TPR_1|PF00515.24|2,TPR_1|PF00515.24|0.0013,TPR_19|PF14559.2|1.1,TPR_19|PF14559.2|0.55,TPR_19|PF14559.2|77,TPR_19|PF14559.2|1e-05,TPR_19|PF14559.2|0.1,TPR_12|PF13424.2|0.032,TPR_12|PF13424.2|0.15,TPR_12|PF13424.2|0.049,TPR_12|PF13424.2|0.24,TPR_12|PF13424.2|0.18,TPR_8|PF13181.2|2.6,TPR_8|PF13181.2|16,TPR_8|PF13181.2|2.4,TPR_8|PF13181.2|6.6e+03,TPR_8|PF13181.2|8.7,TPR_8|PF13181.2|0.012,TPR_14|PF13428.2|26,TPR_14|PF13428.2|11,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|31,TPR_14|PF13428.2|10,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|2.5,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|0.012,TPR_17|PF13431.2|0.072,TPR_17|PF13431.2|1.3e+04,TPR_17|PF13431.2|1.7e+02,TPR_17|PF13431.2|18,TPR_17|PF13431.2|42,TPR_17|PF13431.2|6.7e+02,TPR_17|PF13431.2|3.5e+02,TPR_20|PF14561.2|5.8,TPR_20|PF14561.2|0.0051 S_Transcript_52468:808-1896(+)
ATGACAGATGACAGTGACCGGCCATCAAACGTCGAAGAGAAGGGAGAGAAATGCATCATTAATGGGCACCATATTTCTCCAGCTGGAGTAAATGAAGCAGGTGGGTTAGAAATGTTCACAGAACTTTTACAGAGGTTCCCGAATAATGTGCAATTATTACTTGAAATTGCAAAGGTTGAGGCCATAATTGGAAAAAATGACGAAGCTATAGTGAACTTCGAGAAGGCACGTTCTATTGATCCATATATGGTTACATATATGGATGAGTATGCAATGCTTCTCAAGAATAAATCTGATTATGGAAAGCTAAACAAATTGGTGCATGACTTGTTGAACATTGATCCTACAAGACCAGAAGTATTCGTTGCTTTGTCAGTGTTGTGGCAAAGAAAAGATGAGAGAGGAGCTCTGTCTTATGCAGAAAAGAGTATTCAAATTGATGAAAGGCACGTAACTGGTCATATCATGAAGGGAAACTTGCTTTTGTTACTGAATAGACCAGATGCAGCCGCTGGTGCCTTCAGAAATGCTCAGGAACTTAAACCTGATCTTCGTTCTTATCAAGGCTTAGTTCATTCCTATTTGGCAATTTCGAAGGTCAAAGAAGCTTTATATATTGCCAGAGAGGCAATGAAGATAATGCCTCAATCTGCAAAGGCTTTGAAGTTAGTTGGAGATGTGCATGCTAAAAGTACCAGTGGGAGGGAAAAGGCAAAGAAGTTCTATGAATCTGCTCTCAGATTGGAACCTGGTTACCTTGGGGCTGCATTGGCACTTGCTGAACTTCATGTAGTCGAGGGTCGAAATGGTGATGCTGTATCTCTTCTTGAGCGTTACCTTAAAGATTGGGCTGATGATTCTCTCCACGTCAAGCTTGCTCAAGTTTTCGCTGCCACTAATATGTTGCAGGAGGCATTGTCTCATTATCAGGCTGCATTGAGGATGAACCCACAGAATGAAGCTGCAAAGAAAGGGTTAGAGCGTTTGGAGAAACAAATGAAGGGAGTTGATCCAGATGCACCTGATGAAGATGAAGAGACTGAGGTTGATGATGGTGATGGGGACCAGGAGGAAACGGAGCTTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52468.p1 GENE.S_Transcript_52468~~S_Transcript_52468.p1 ORF type:complete len:363 (+),score=109.94,TPR_11|PF13414.2|0.015,TPR_11|PF13414.2|0.69,TPR_11|PF13414.2|0.00018,TPR_11|PF13414.2|0.0028,TPR_11|PF13414.2|0.096,TPR_2|PF07719.13|1.7e+03,TPR_2|PF07719.13|1.9,TPR_2|PF07719.13|60,TPR_2|PF07719.13|0.038,TPR_2|PF07719.13|2.5e+02,TPR_2|PF07719.13|1.3,TPR_2|PF07719.13|1.9e+03,TPR_2|PF07719.13|0.00033,TPR_16|PF13432.2|0.062,TPR_16|PF13432.2|1.4,TPR_16|PF13432.2|0.0063,TPR_16|PF13432.2|4.9,TPR_16|PF13432.2|0.00011,TPR_16|PF13432.2|0.11,TPR_1|PF00515.24|0.18,TPR_1|PF00515.24|3e+02,TPR_1|PF00515.24|0.015,TPR_1|PF00515.24|6.3e+03,TPR_1|PF00515.24|2,TPR_1|PF00515.24|0.0013,TPR_19|PF14559.2|1.1,TPR_19|PF14559.2|0.55,TPR_19|PF14559.2|77,TPR_19|PF14559.2|1e-05,TPR_19|PF14559.2|0.1,TPR_12|PF13424.2|0.032,TPR_12|PF13424.2|0.15,TPR_12|PF13424.2|0.049,TPR_12|PF13424.2|0.24,TPR_12|PF13424.2|0.18,TPR_8|PF13181.2|2.6,TPR_8|PF13181.2|16,TPR_8|PF13181.2|2.4,TPR_8|PF13181.2|6.6e+03,TPR_8|PF13181.2|8.7,TPR_8|PF13181.2|0.012,TPR_14|PF13428.2|26,TPR_14|PF13428.2|11,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|31,TPR_14|PF13428.2|10,TPR_14|PF13428.2|1.7e+03,TPR_14|PF13428.2|2.5,TPR_14|PF13428.2|0.043,TPR_14|PF13428.2|0.012,TPR_17|PF13431.2|0.072,TPR_17|PF13431.2|1.3e+04,TPR_17|PF13431.2|1.7e+02,TPR_17|PF13431.2|18,TPR_17|PF13431.2|42,TPR_17|PF13431.2|6.7e+02,TPR_17|PF13431.2|3.5e+02,TPR_20|PF14561.2|5.8,TPR_20|PF14561.2|0.0051 S_Transcript_52468:808-1896(+)
MTDDSDRPSNVEEKGEKCIINGHHISPAGVNEAGGLEMFTELLQRFPNNVQLLLEIAKVEAIIGKNDEAIVNFEKARSIDPYMVTYMDEYAMLLKNKSDYGKLNKLVHDLLNIDPTRPEVFVALSVLWQRKDERGALSYAEKSIQIDERHVTGHIMKGNLLLLLNRPDAAAGAFRNAQELKPDLRSYQGLVHSYLAISKVKEALYIAREAMKIMPQSAKALKLVGDVHAKSTSGREKAKKFYESALRLEPGYLGAALALAELHVVEGRNGDAVSLLERYLKDWADDSLHVKLAQVFAATNMLQEALSHYQAALRMNPQNEAAKKGLERLEKQMKGVDPDAPDEDEETEVDDGDGDQEETELL*

Click here to download the sequence:
Link to NCBI Protein BLAST