Transcript Information: S_Transcript_52470.p1


Annotated TAIR IDAT2G39090.1
Annotated Gene Nametetratricopeptide repeat (TPR)-containing protein
Annotated Gene Symbol(s)APC7, AtAPC7
Annotation TypeHomolog
Chromosome Positionchr2:16312771-16317233 | Reverse length=558
E-Value3E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8454152264029
Replicate 20.97131777926166
Replicate 31.9138688388642
Condition 2: 8 Hour
Replicate 10.73767073424045
Replicate 21.1959793297967
Replicate 31.273588378914
Condition 3: 24 Hour
Replicate 11.7860596564637
Replicate 20.71269847724363
Replicate 30.47588763028521


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52470.p1 GENE.S_Transcript_52470~~S_Transcript_52470.p1 ORF type:complete len:318 (+),score=46.29,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|0.049,TPR_14|PF13428.2|0.091,TPR_11|PF13414.2|0.00011,TPR_11|PF13414.2|37,TPR_11|PF13414.2|0.2,TPR_2|PF07719.13|0.0037,TPR_2|PF07719.13|1.8e+03,TPR_2|PF07719.13|0.54,TPR_2|PF07719.13|0.35,TPR_7|PF13176.2|3.5e-05,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|3.4,TPR_7|PF13176.2|5.7e+03,TPR_6|PF13174.2|1.1,TPR_6|PF13174.2|4.6e+02,TPR_6|PF13174.2|6.3,TPR_6|PF13174.2|1.4,TPR_8|PF13181.2|0.11,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|0.063,TPR_8|PF13181.2|3.9e+03,TPR_1|PF00515.24|0.014,TPR_1|PF00515.24|3.3e+03,TPR_1|PF00515.24|14,TPR_1|PF00515.24|23 S_Transcript_52470:176-1129(+)
ATGGACGTTCCAAAAGACCATATGTCTACTCTCCTCGATCATGGTCTTTACAATTCAGCTAAACTTCTGGGGTATTTCCTTGTTTCTTTGTCTTCTTTAAATGCCGAAACTAATCCCAATGCCAAGGCCGAAAGTTTGGTGCTTCTTGGAGATGCATTGTTTCGGGAAAGGGAATATCGGCGAGCGATTAGTACATATAAACAGGCCTTGCAATTTCACAAGATCATCCCAAAGCAAAGCACTCCTACACTAAGAAGTTCATTGTCTACACCAAGCAGGTCTTCTTCTCCAAGTTCTGTTAATATTTCAGCGATTAATGAAAATGAGGTCAAATTCAAAATTGCATCCTGTCATGCTGCGCTGAATGAGAACAAAGCTGCTATCTTGGAGATGGAGGGAATCCCTAGCAAGTTAAGAAATTTGCCGATGCATCTAATGATGGGAAAGCTTTATCGAAATACTCGACATACTCGTGCGGCTGCTGCGAGTTACAAAGAGTGTTTGAGACATTGTCCCTATATCCTCGAGGCTATAAGTGCTCTGGCTGAGCTTGGAGCTTCTGTTAAGGAAATTATTTCCTTGTTTCCTCAGATACTAAGTAGAAGCACGAGGCCTCTCTCTGATCATCTTGAATCTGGCCGCTGGCTACAGCGTTATGTTGAGGCCCAGTGTTGTCTTGCATCAAATGATTACAAAGGTGGGTTAGAAATGTTCACAGAACTTTTACAGAGGTTCCCGAATAATGTGCAATTATTACTTGAAATTGCAAAGAGCAAGGTTACTCAGACATGGCACCTACCCCGGCTTGTTGCATGTCAACACAACACCCTGGTCGGTAAGACACAAGACACGCCTGGGATACGGCATAGTCATGGACGACACGACTGTTTGGGGAGGGAGAGGCAGAGGAAGAGGGAGAAGGAGAGATGCAACAAAATTGGTACCAGAAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52470.p1 GENE.S_Transcript_52470~~S_Transcript_52470.p1 ORF type:complete len:318 (+),score=46.29,TPR_14|PF13428.2|1.1,TPR_14|PF13428.2|0.049,TPR_14|PF13428.2|0.091,TPR_11|PF13414.2|0.00011,TPR_11|PF13414.2|37,TPR_11|PF13414.2|0.2,TPR_2|PF07719.13|0.0037,TPR_2|PF07719.13|1.8e+03,TPR_2|PF07719.13|0.54,TPR_2|PF07719.13|0.35,TPR_7|PF13176.2|3.5e-05,TPR_7|PF13176.2|1.2e+03,TPR_7|PF13176.2|3.4,TPR_7|PF13176.2|5.7e+03,TPR_6|PF13174.2|1.1,TPR_6|PF13174.2|4.6e+02,TPR_6|PF13174.2|6.3,TPR_6|PF13174.2|1.4,TPR_8|PF13181.2|0.11,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|0.063,TPR_8|PF13181.2|3.9e+03,TPR_1|PF00515.24|0.014,TPR_1|PF00515.24|3.3e+03,TPR_1|PF00515.24|14,TPR_1|PF00515.24|23 S_Transcript_52470:176-1129(+)
MDVPKDHMSTLLDHGLYNSAKLLGYFLVSLSSLNAETNPNAKAESLVLLGDALFREREYRRAISTYKQALQFHKIIPKQSTPTLRSSLSTPSRSSSPSSVNISAINENEVKFKIASCHAALNENKAAILEMEGIPSKLRNLPMHLMMGKLYRNTRHTRAAAASYKECLRHCPYILEAISALAELGASVKEIISLFPQILSRSTRPLSDHLESGRWLQRYVEAQCCLASNDYKGGLEMFTELLQRFPNNVQLLLEIAKSKVTQTWHLPRLVACQHNTLVGKTQDTPGIRHSHGRHDCLGRERQRKREKERCNKIGTRK*

Click here to download the sequence:
Link to NCBI Protein BLAST