Transcript Information: S_Transcript_52475.p1


Annotated TAIR IDAT5G61920.1
Annotated Gene Nameunknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage, D bilateral stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G67170.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24864830-24865628 | Forward length=238
E-Value4.8E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 126.175287399076
Replicate 227.288187084295
Replicate 326.572100015188
Condition 2: 8 Hour
Replicate 133.461220991028
Replicate 232.306715634342
Replicate 330.922002611174
Condition 3: 24 Hour
Replicate 123.785054063772
Replicate 223.558435717519
Replicate 322.898961367803


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52475.p1 GENE.S_Transcript_52475~~S_Transcript_52475.p1 ORF type:complete len:304 (+),score=80.99 S_Transcript_52475:224-1135(+)
ATGTCAGCAAGAGGACGTCCATCAGCACCTGGGATGATGCGGCATGGTCCCCCTCCTGGAACAATTGCTTCAACTGGTCATCTCCCTCCAGATTTGGCTGAAAAAGAGCTGGCTGCCCAGGTTGCAGAAATAGAGCATCTTGTGATGGAAAATCGGAGGTTGGCGGCATCACAGGTTGCTTTACGGCAGGATCTTGTCGGTGCTCATGACGAAATACAAAGACTTAGGGCACACATTAGGAGTACCCAGACAGAGAGTGATATTCAAGTCCGCGTCTTACTGGATAAGATTGCCAACATGGAGTCAGATATCAAGGCTGGGGAGAGTGTAAAGAAGGATCTGGAACAGGCTCACAAGGAGGCACAAAGTTTAGTAACAGCTAGACAAGAACTGATGGTGAAGATTCAACAGGCCAGTCAGGAGCTCGAGAAGTGTCGTGTTGATGCAAAAAAGATTCCTGATATGCTCTCTGAACTGGATAGTATGAGACTGGAACACCAGCGATTGCGTTCTGCCTTTGAGAATGAAAAGCACATGAGCCTTGACCTTGTTGAGCACATGCAAGCAATGGAAAGGAAGTTGATAGGAATGATAAGGGAGGTAGAGAGATTACGAGCTGAAGTACTGAATGCGGAGAAAAGAGGACATGCTCCTTATGGGGGTGCATACCGTAGTCCAAACCCTCAATATCCCCCTTCTATGCAAGGCAATGGGCCCTATTATGATCCTTATGGAAGAGCTCATGTTCATATGGGGACAAGTACAGCGATGGAAGGAATGGCACTGCTACCGCATGCCAATGCCAACGGCCCCCCTCCTGCCGTTGGCGTCATGCCTGGTGCACCTGTTTCAGCTGCTGCTGCTTCTATGGCTTGGGGAGGTGCTTATGATCCGAACATTGCTGGGAAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52475.p1 GENE.S_Transcript_52475~~S_Transcript_52475.p1 ORF type:complete len:304 (+),score=80.99 S_Transcript_52475:224-1135(+)
MSARGRPSAPGMMRHGPPPGTIASTGHLPPDLAEKELAAQVAEIEHLVMENRRLAASQVALRQDLVGAHDEIQRLRAHIRSTQTESDIQVRVLLDKIANMESDIKAGESVKKDLEQAHKEAQSLVTARQELMVKIQQASQELEKCRVDAKKIPDMLSELDSMRLEHQRLRSAFENEKHMSLDLVEHMQAMERKLIGMIREVERLRAEVLNAEKRGHAPYGGAYRSPNPQYPPSMQGNGPYYDPYGRAHVHMGTSTAMEGMALLPHANANGPPPAVGVMPGAPVSAAAASMAWGGAYDPNIAGK*

Click here to download the sequence:
Link to NCBI Protein BLAST