Transcript Information: S_Transcript_525236.p1


Annotated TAIR IDAT5G42905.1
Annotated Gene NamePolynucleotidyl transferase, ribonuclease H-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17201414-17202323 | Reverse length=258
E-Value2E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.071927030365353
Replicate 20
Replicate 30.04984523265838
Condition 2: 8 Hour
Replicate 10.17290857013892
Replicate 20.30232227891522
Replicate 30.11522079786476
Condition 3: 24 Hour
Replicate 10.059040225650255
Replicate 20
Replicate 30.27267075032558


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525236.p1 GENE.S_Transcript_525236~~S_Transcript_525236.p1 ORF type:5prime_partial len:370 (+),score=44.31,zf-RVT|PF13966.2|2.4e-21,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,RVT_3|PF13456.2|3.3e-20,RNase_H|PF00075.20|1.3e-06 S_Transcript_525236:2-1111(+)
GTATTGTGCTGGGGGGAAACATCAGATGGGATGTTTTCTGTCAAGTCGGCTATCAAACTTCTCACTCGAGAAAGGGATTTAAACAATGATAAAAAGTGGGATATAGCATGGCGGGTGAAAGTTCCACAAAGGATTAGAATGTTTTTATGGTTGGTTTTCCATGATCGAGTGCTTACTAATGCAAATTGCACAAGGAGGGGACTTACTGATGACCCTCGGTGTAAATCCTGTGGTGGGGCTGAGGAAACCATATGCCATGTTTTACGTGACTGCCCATATTCTGCAGCGTTGTGGCGTGAAATGGGAATGTCCTCCCCTGCAAGTCTATTCTGGACGATTGGATTTCACGAGTGGATGATAGAAAACTTGACCTGTTCTGGCCAACAAGACCACCCTGATGGCCCGGCGAATTTTGCAGTCACCATTTGGTGGTTATGGAAATGGCGCAATTGCCGAGTTTTCCATAGAGAAGAGGAGTTGCCCTTGAATCCTGTATATTTCTTACTGCATAAGTTTAAAGAGTGTAAAGAAGCTATGGACCAAGACGACTTTATTACTACTCGTCCCTCCAAGAGGAGGCATACAGAATTAATAGCTTGGCAGTCTCCTCCTGATGGTTGGATCACGTTGAACACAGATGGTGCTTGCAAGGGAAACCCCGGTCCTGCTGCTGGTGGTGGACTCATCAGAAACAGTAAGGGTGAACTAATCCGAGCCTTTGCAGCAAAGTATGGTATCTGCTCTATTACTAGGGCAGAAGCGTTGGCTATTTGGCAAGGATTACGTATGGGAAAAGAAGGAGGCTATCGAAGAATCATTATTCGATCCGACTCACAAATAGTCTTGAACATACTCAAATCTGATGAACCATGCACTACTACGCTACAGCATATTATCAAGCAATGCCAATCTCTCATTCACTCGGATGCATGGGAAGTTAGACTGGAGCATTGTCTTCGTGAAGCAAATAGAGCGGCGGACTATCTTGCAAATGTTGGTATAAACCAAGTCACAGACCTCCAATTTTTCGCCTCTCCCCCGCCTGAACTCCAGAGGATCTTGCTTGAAGACATGAGGGCAGTGGCTTGGCCATGTGGGTTTCGTTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525236.p1 GENE.S_Transcript_525236~~S_Transcript_525236.p1 ORF type:5prime_partial len:370 (+),score=44.31,zf-RVT|PF13966.2|2.4e-21,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|1.6e+04,RVT_3|PF13456.2|3.3e-20,RNase_H|PF00075.20|1.3e-06 S_Transcript_525236:2-1111(+)
VLCWGETSDGMFSVKSAIKLLTRERDLNNDKKWDIAWRVKVPQRIRMFLWLVFHDRVLTNANCTRRGLTDDPRCKSCGGAEETICHVLRDCPYSAALWREMGMSSPASLFWTIGFHEWMIENLTCSGQQDHPDGPANFAVTIWWLWKWRNCRVFHREEELPLNPVYFLLHKFKECKEAMDQDDFITTRPSKRRHTELIAWQSPPDGWITLNTDGACKGNPGPAAGGGLIRNSKGELIRAFAAKYGICSITRAEALAIWQGLRMGKEGGYRRIIIRSDSQIVLNILKSDEPCTTTLQHIIKQCQSLIHSDAWEVRLEHCLREANRAADYLANVGINQVTDLQFFASPPPELQRILLEDMRAVAWPCGFRF*

Click here to download the sequence:
Link to NCBI Protein BLAST