Transcript Information: S_Transcript_525285.p1


Annotated TAIR IDAT4G38140.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:17899868-17900305 | Reverse length=145
E-Value1E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30.069073917916107
Condition 2: 8 Hour
Replicate 10
Replicate 20.16757939055975
Replicate 30.079834635224649
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525285.p1 GENE.S_Transcript_525285~~S_Transcript_525285.p1 ORF type:complete len:267 (-),score=63.63,zf-RING_2|PF13639.2|7.4e-11,zf-rbx1|PF12678.3|8.8e-07,zf-RING_11|PF17123.1|4.7e-06,zf-C3HC4|PF00097.21|6.6e-06,zf-C3HC4_2|PF13923.2|1.5e-05 S_Transcript_525285:51-851(-)
ATGGATCCAACCTCAGTTATTGAGCATGATGATCCCCTGCTGCTGTATGCACATTATTCAGTTCTAGGGTTCACAATCCAATGTTGGGCTATTGACCCTATCCCAACTGATCAACATCAGAGTCCAGTTGATGATGAATTTGTAGTCAACTTAGTTTATAACAAGTTTGGTACTTCAAGGGACTTGATCTTCAAGATGATGTACATGGAGGAGGAGTATTGCAGGGGGAATGTGGTTGAGTGGGTTGAGAAACTTGGAGTTGAAGAAACTGTGTTTGAGCCCACCGTCAAAGCCGTTCTATGTGGGATTGAAACCTTGACATATCAAGTTCAACATCTGGGCCGAAAGTCGCTCGCTATGATGGTCGAGATCAACTTCTTTGAGCCTACTTCTGTTGTTCCTGACCCCAACTTGGTCCAGGAGGCTAACATTAATGTTAGCGACGAGGACGAGGAAGATGAGCCAACTTATGAGGAGGAGGAAGAAGAAGAAGACGAAGAGGGCAACGAGGTTGTAGAGGAGCAATATAGAATGGCAAAGGGGATGTTGGAAGCAAGTGGGGTGAGATTTGATGAAGTTAGTTCGGTGTCTAATAATAAAGTTGTGAAAATTGGATGTTGTCCAATTTGCTTGGATGAGTTTGGGATGGAAGATGATGATCAAGTACAGGTAGCTGTAATGCCAGCTTGCTCTCATGTCCTCCACTTGGATTGTCTTCTTCCTTGGATCGTTAATGGTGGTTCCAATTGTCCCTTGTGTAGGTCACAAATACTTTCACCTGTTTTCATGGAGGAGTGCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525285.p1 GENE.S_Transcript_525285~~S_Transcript_525285.p1 ORF type:complete len:267 (-),score=63.63,zf-RING_2|PF13639.2|7.4e-11,zf-rbx1|PF12678.3|8.8e-07,zf-RING_11|PF17123.1|4.7e-06,zf-C3HC4|PF00097.21|6.6e-06,zf-C3HC4_2|PF13923.2|1.5e-05 S_Transcript_525285:51-851(-)
MDPTSVIEHDDPLLLYAHYSVLGFTIQCWAIDPIPTDQHQSPVDDEFVVNLVYNKFGTSRDLIFKMMYMEEEYCRGNVVEWVEKLGVEETVFEPTVKAVLCGIETLTYQVQHLGRKSLAMMVEINFFEPTSVVPDPNLVQEANINVSDEDEEDEPTYEEEEEEEDEEGNEVVEEQYRMAKGMLEASGVRFDEVSSVSNNKVVKIGCCPICLDEFGMEDDDQVQVAVMPACSHVLHLDCLLPWIVNGGSNCPLCRSQILSPVFMEEC*

Click here to download the sequence:
Link to NCBI Protein BLAST