Transcript Information: S_Transcript_525306.p1


Annotated TAIR IDAT3G50390.1
Annotated Gene NameTransducin/WD40 repeat-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:18702137-18703546 | Forward length=469
E-Value3.2E-164
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.12571390061262
Replicate 30.10508681529117
Condition 2: 8 Hour
Replicate 10
Replicate 20.063737460512042
Replicate 30.12145782111101
Condition 3: 24 Hour
Replicate 10
Replicate 20.32284631875139
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525306.p1 GENE.S_Transcript_525306~~S_Transcript_525306.p1 ORF type:5prime_partial len:351 (+),score=30.09,WD40|PF00400.28|2.3,WD40|PF00400.28|0.39,WD40|PF00400.28|0.003,WD40|PF00400.28|1.6e-05,WD40|PF00400.28|0.31,WD40|PF00400.28|0.029,WD40|PF00400.28|1.6e-06,PQQ_3|PF13570.2|8.5,PQQ_3|PF13570.2|6.6,PQQ_3|PF13570.2|1.1,PQQ_3|PF13570.2|25,PQQ_3|PF13570.2|1.1e+03,Nucleoporin_N|PF08801.7|0.041,Nucleoporin_N|PF08801.7|17,Nucleoporin_N|PF08801.7|1.9e+02,Nucleoporin_N|PF08801.7|3.7,Nucleoporin_N|PF08801.7|10 S_Transcript_525306:2-1054(+)
TACTCCTTAGCTGCATCCGGTGATTTACTGTATACGGGTTCCGATAGTAAAAATATTCGAGTTTGGAAAAACCAACGAGAATTCTCGGGATTTAAATCCAATAGTGGACTTGTGAAGTCAATCGTTATTGCCGGTGAAAACATATTCACGGGACATCAAGATGGGAAAATTCGAGTTTGGAAGATATCCGCAAAAAATCCAACCATTCATAAACGAATCGGAACACTCCCAACTTTCAAGGCATATATTAAGTCCTCTGTCAAGCCTAGTAGCTATATAGAAATAGGAAGAAATCGCAATGTATTATGGATTCGACACTTGGATGCTATTTCATCTCTTAGCCTTAGCGAGGTCCATAAGTTCTTATACTCCGCATCATGGGATAAAACAGTGAAAGTGTGGAGAACATCAAACTTTAAGTGCTTAGAATCAATCCAGGCCCATGATGATGCCGTCAATGCTGTTGTTGCTGGGTTTCATGGTCTCGTCTTTACCGGGTCAGCTGATGGCACTGTTAAGGTGTGGCGTCGTGAGCTACAAGGCAAGGGAACTAAGCATTTCTTCTCCCAATCTCTATTAAAGCAAGAATGTGCTGTGACTGCTTTGGCAGTTGATCCAATAGCCACACTAGTTTATTGCGGGTCGTCAGATGGGCATGTAAACTTTTGGGCAAAAGAAGAGTTTGCTTCCCCAGGTGGGGTCCTTAAAGGTCACAAACTAGCAGTGTTGTGTCTGGCCACCGCAGGGACTCTGGTGTTCAGTGGATCCGCGGATATGAGCATATGTGTATGGAAAAGGATAAATAACGGTTGTGATATGGATAATGCTCAACATATATGCTTGTCCATCTTGACAGGACACAATGGTCCTGTAAAATGCTTGGCCGTTGAGGCAGAAAAGGAAACAAGACCGTTTGAAGGGAAATGGATTTTGTACAGTGGAAGCTTAGACAAGTCGGTGAAGATGTGGAGGATATCCGAGCAAGCTACTCCACAAATGTCTCTTTCTCAAAGTAGGCATATTATGCAAGGACAAGTAATGTTTAATCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525306.p1 GENE.S_Transcript_525306~~S_Transcript_525306.p1 ORF type:5prime_partial len:351 (+),score=30.09,WD40|PF00400.28|2.3,WD40|PF00400.28|0.39,WD40|PF00400.28|0.003,WD40|PF00400.28|1.6e-05,WD40|PF00400.28|0.31,WD40|PF00400.28|0.029,WD40|PF00400.28|1.6e-06,PQQ_3|PF13570.2|8.5,PQQ_3|PF13570.2|6.6,PQQ_3|PF13570.2|1.1,PQQ_3|PF13570.2|25,PQQ_3|PF13570.2|1.1e+03,Nucleoporin_N|PF08801.7|0.041,Nucleoporin_N|PF08801.7|17,Nucleoporin_N|PF08801.7|1.9e+02,Nucleoporin_N|PF08801.7|3.7,Nucleoporin_N|PF08801.7|10 S_Transcript_525306:2-1054(+)
YSLAASGDLLYTGSDSKNIRVWKNQREFSGFKSNSGLVKSIVIAGENIFTGHQDGKIRVWKISAKNPTIHKRIGTLPTFKAYIKSSVKPSSYIEIGRNRNVLWIRHLDAISSLSLSEVHKFLYSASWDKTVKVWRTSNFKCLESIQAHDDAVNAVVAGFHGLVFTGSADGTVKVWRRELQGKGTKHFFSQSLLKQECAVTALAVDPIATLVYCGSSDGHVNFWAKEEFASPGGVLKGHKLAVLCLATAGTLVFSGSADMSICVWKRINNGCDMDNAQHICLSILTGHNGPVKCLAVEAEKETRPFEGKWILYSGSLDKSVKMWRISEQATPQMSLSQSRHIMQGQVMFNH*

Click here to download the sequence:
Link to NCBI Protein BLAST