Transcript Information: S_Transcript_52538.p1


Annotated TAIR IDAT4G31570.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa - 84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other Eukaryotes - 38623 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:15297061-15306036 | Forward length=2730
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.8046660615067
Replicate 23.7273781115801
Replicate 34.2689397394338
Condition 2: 8 Hour
Replicate 15.6691099725049
Replicate 23.6684273545887
Replicate 33.0009888967676
Condition 3: 24 Hour
Replicate 15.4996642493918
Replicate 25.7152220496876
Replicate 33.3733831647422


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_52538.p1 GENE.S_Transcript_52538~~S_Transcript_52538.p1 ORF type:complete len:2415 (+),score=735.13 S_Transcript_52538:1048-8292(+)
ATGCAGGAAGCTGACAATTTTGGCCCGAAGCACTTTGGTCAAAGTGTTCAGCAGGATCTGGATGGAGACAGTAGGCTTTCCATGCCAGCTTATCATGAGGGTTGTGAAACACCTGCAGCTTCTAATGACATAAGTGCCAAGTTGACATCGCCAGAACCTGACCGAAAACCTGATGTCTCGGACGTTGCAATCATTGCGTGTGATGAAGGTTATGAAACAATGGAGGCTTCTGTTCCTGTTGAGACGGCCAATGTAACTGCTGAATCAAGAACAGGCAGCAGTCACAAGCTGAATCAGCCACATGAAGATCGAATGGATGGATCATGTACAGAAAGAGAAGTTCATGTGCATTCCATGTCAAATGATTCCAGATGTTACAAAAATGAAGCAGATCCAGCTGATTTAGAGAGGAGAGATGATAAAGGGTCCGATGAGCATTGTTTACATGAAAACAAAATTGTAGATTCTGTTCAAGAGCAACCTGTGTGTGTTGGTTTACAAGGCAACTCTATAAACCTTCATCAGCTTGCTGAGTTACTAAAACAGCTTCCTGAAGGTGATTTCAGGTACTTGATCAAGTCAAGGGAAATGGTGGGTCATAGAGAAGATGTTGTGCTGCAAGATTGCACGATAGATGTTCCTGAAAGATTCCAAGAGCACCTTTATCTTTCAAATATTTCAAAAGATTTCTTTCACTTGCAACTTCAAGAGCAGCATGAGCAACAAGCTGATGTTGATCGTCAGCATGGTTCATTGGTTGGTGAAGTACCTGCAATCACTCCTTCACTTTCAGTTGTTCAGGAAGTTGATAATAGCGTTGCCACGGAGCTTTCTCAGTGTAAATTGGAGCTAGAGGCTGCTATGAGGGAGAGAGTGGAGCTTCATAGCTTGTATCAAAGTGCGAAGGAAGATGTTATGATATACTCTGCCAAAGTCGATGAGCTCCGGATCAAATTGGAGGAAACAGTGGGGCACCTGTCCAGTCTTTCTGCAGATCTCGTTAGCTGCAAGGTCCTTTTGGAAGCTTCACAGGATGAAAATGAAAAACTTTCAGAAGGTTTAGCATCAGTGACTGATCAGAGGAATGAATTCGAGGTGGCCATGGAACAATATGTTCATGAAAATAGAAAACTTTCAGGGGATTTGGCTGATAGTGGTATGCAGTTGGCTGCTCTACAGCAGGAAATAGGCAGTTTGAAAAGGAGTGTTGCTTCTGTAGAAGATGAGAGAAAAAAATTTGAGGAGGAAAAGGAAATCCTCATTCGTGAGAAGGAGACACTTTTAGGTGATCTTTCGGATTGCAAGAGTGCAATGGGAGCTTTGCAGCAGGATTATGCTGGTGTAAATATGAATCTTGCAACAGTGACAGAAGAGCATAATAAGCTGAAGGAGCATGAGGTGTTTCTAACCCAGGAAACTGAGAGGCTTTCTGCTGAACTTGTTGCTGTCCAAGATAAGATGTCAGTACAACATCAGGAACATGTGCAGCTGCAGGCTGATCTGCAAGAAACAATGACACGCCTTGAACAATTGGCTGAGGAAAACATTATTTTACAGAGCAACTTGGAAATTCATAAAGCTAAGTTAGCTGAGGTTGATAGCCAACAAATCCAGCTTTCTTTAGTGGCCGGGAGTGTCAGTAGTGAAGCCAAGTCTCATAGTGGTGCAGCTGATATTGATAGTTCTATCAGAATATCCAAGGAGGAAGATGAGTATATGGTCTCGTCTGTCTTGGCTGCTTCTGATGACACCTTTCAGAGCACCGCACTTCGTCAATCTGGGTTGGATTTGCATGATGATACTTCCACTGCTGTAAGACTGAAAGGGTATTTGGAGGAGGCTGAGAAAATGATTCAGATAATTGAGAAGTTGATGGACGGGATGCACTTTCAGTCAACATCCCTTAGTCCGTTGGCTGGGAAAGGTGCTGCTCCAGGAGTATCAAAACTGATTCAAGCTTTTGAGTCAAAAGCTAATATTGATGACCATGATTCCAGCGAAAGTCTGCTGCCTTCTGATCCATATTCGTCTGCAAAGGAGCAAATTAGTCACTTGAGAGCTGTGCTTAAGGCACTGACACAGAATGTTGACCATGCTCAAGCTGTTATCATGGAAGAAAAAGATGGACGTAAAACTGATATTGTTGTCTGTAGGGAGCTTGAGGTTGAAATTGAAGCTCTGAAGGGCTTCAACAATAACCTAGAAATGAGGAATATTGAGCTAGAGGTACTTTGTGGAGCTATGAATCAGCATGTACTTGATATTGAAGTAAAGAAAACGAGGCTTGAAGATCTTTGTGAAGCTTTACAGATACAGGAGGCAGGTCTTCAGTCACAAAACATTGAGCTTCTGAAGAAGTTGAATGACTTCCAATCCAGAATTAGTGGGTTTGAGGTTCAGCTAAATGGGGTACGAAGCAGCTCAGATGTGGTGGCATCTGTGATATGTGATGAAGTTACAACTATGCAAAGGGAAATCAGGGAGGATATTTATGCTGTTCATAGACGATGGAAAGCTGCTGTTGCTGAGCTTGTTCCGTATGTCGAGAAGCTTGATGCAGTTGTTGGATCTGCTTCTAGCCACCCTGACCATGGTGAGACTCACAATGACGGGGATACAGAGGTTGATTTTGTTGAAGCACCTGCATCACATCTCCAGTCTTCAGTTTTGTTACTTATTCAAAGATACAAGGAGGCAGAAGGGCGGGCCAGCTTATTAGATAATGATCTTAAATCTAGGATGACTGACTTTGGGGAGCTGCAGGGCCGTGTTGAGGTGCTTGATTCTATAAATTTTCAGCAGCAGAATGAGATTCTTGTCCTCAGGGAGAGCTTGACACACGCAAAGGATACCTTTGATGCCATACACGTTGAGTTGCTGGAGAAAACTCGGGAACTTGAGCAGTCTGAGCAGAGGGTTTCTTCTGTTAGAGAAAAACTCAGTATTGCTGTTGCAAAGGGCAAGGGCTTGGTTGTGCAACGTGACACTCTTAAGCAGTCACTGGCCGAGATGTCAGGCGAACTGGAGAAATGCACACAGGAATTGCGATTGAAAGATTCTAGGCTATATGAAGTGGAAGAGAAACTGAAGGCCTATTCAGAGGCTGGTGAACGGATGGAAGCTCTGGAGTCTGAGTTATCATACATTCGTAACTCTGCAACAGCTCTCAGAGAGTCATTTCTTCTGAAAGATTCTGCTCTTCAGAGAATAGAAGAGATTCTAGAAGATCTTGAGCTGCCAGATCATTTTCATTCCAAGGACATCATACAGAAGGTTGACTGGCTGGCAAAGTCAGTTGCTAGTAATTCTTTGCCACCTGCTGACTGGGATCAAAGAAGTTCCGTTGGAGGAGGCTCATACTCAGATGCTGGTTTAGTCATGACAGATGGGTCCAAGGAAGATGTCCCACCTACCTCAAATCCTGTTGACGATTTGAGAAGAAAATATGATGAGCTGCAGACTAAGTTCTATGAATTGGCTGAACAAAATGACATGCTGGAGCAATCATTAATGGAAAGAAACATTTTGGTGCAGAGGTGGGAGGAGATTTTGGATAGGATCAATACACCTCCCCAAATACGATCGATGGAGCCGGAAGAGAGGATTCATTGGTTAGGAACTGCCTTGTCGGAGGCTGACCACCACATGAGATCACTTCAGCAGAAAGTTGAAACCCTTGAAAACTATTGTGGGTCACTCTCAGGGGATCTGGAAGAATCTCAAAGAAGAATGGCAGAACATGAATCAACTCTCCACACCCTTCTTCATGAGAAGGAAAGTGCCTTGTCAGATGCTGAAGACCAGTTGAAGTCTCTTCAGCAGAGGATTGGTAATCTTGATGATCATTGTGGATCCCTGTCCTCTGCTTTGGAAGAATCTCAAAGAAGGATATCTGAACATGAATACTCTTTGCGAGAAGTTCTTCATGAAAAGGACATTCTTTCCAGTAATTTGGTGACAATGACTACTGATCGCGAAATAGCCTTGAGTACAGTTGCTCAATATGAGCAAGAAATTAATAGATTAAAGGAAGATGTTGACATGTTGCAGGAAAAACTAGTAGAGAATCTTGGAAACAAGGACCATATTGACCAAATTGAGAGTGAGTTGAAGAGATTACAGCACTTGATTCTTGATGTACTCCAGGTCTCTGAGACAGAAGATGTGTCTTCTGACGAGAGTAATATTCAGCACCTGGAAAGGTTGATTAGACTACTCAGGAATCATATCAACGGAGTTCGTGCTGAAAGCCATGGGCTGAGGGAAGTAGTTGACAATGACGTGTCTGACGAGACTGCGGAGGCACGAATTGTGACAGAGACAGAAAATGAGCATCTGTCTGATGCAAATCAGGATGAGCCTAATATGAGGAGCACAATCTCTGAGGAGCAGGTTGTGACAGACCTGAGAAGACAACTTGCTGAGGCTTTAGATGAAGTAGTCCATCTTAGGGAGGAAAAAGATGCTTACATGCAGAAAAGTCAATCTTTGGCTAGTGAGGTGGAAGCATTAGAGAGTAATATGAAGGAATTTCAGGAGTTGCTTAAGCAAGAGGAGCAGAAGTCAGCATCTCTTCGGGAGAAGCTGAATCTTGCAGTTAGGAAAGGCAAATCATTGGTCCAACAGAGAGATAGTCTAAAACAGAATATTGAGGACATGACCAGTGAGATTGATCGATTGAAATCTGAGATAAATAGTCAGGAGCAGTCTCTTTTGGACTCAGTACAGAAGATAAATGACTTGTCCTTCCAGATGGAAATATATAAAGCATTTGAAACTGAGAACATGTCCCTGAAAACCCGCCTGATTGAGGCTGAGCAACATTTACAGCAAAATGGCCATACTTTGAGCATGGTGCTCAATAAACTAAGTGACGTTGATACTGGTGGGGAGATTAGTTCTCATGATCCACTGCAGAAGTTGGAAGAAATTGGGAAGTTGTGCGCTGATCTACATGCTGCTGCAACATCTTCTGAGAAGGAAGCAAACAAATCCAAAAAGGCAGCTGAGCTTCTAGTGGCTGAGTTGAATGAGGTTCAGGAAAGAAATGATGTTCTGCAGGAAGAAGTATCCAGGGCCTATGATGAGATGTCAAGACTTTCAAGGGAAAGGGAACTTGCAGATTCAGCCAAAGTTGAAGCTCTTTCACATTTGGCTAAACTTTCTGAAGAGAGGAAAAAGCACCTTGCTGAATTTGAGAGGTTGAATACCTGTGTGCATGAATTGAAGAAAGGCTTCATTGAGATCAATACAGTAACTGGTGATGTGTTTGCCAAGGATATACAGCTTCTGCTCAGTGTGAGGACCCATATGGAGTCATGCCTAGGGCAGATTGGAATGAACTTCGTAGCCACCAAATATTATGTTGTATCCGAGGATATCCGGTCAACACGTTCACTGTGGGACAATGTGTTGCCTGATCAACTGGCTGAGGATGTTGGATTTGAGCAGTATCTGCAAAGACTACTGGAAGCATTTGGTGCCTTTAAGCAGAGAGTAAACAGCCACTCAATGTCATTCAATAAGGAGGCTGAGCATTTCAACAATGTGATTAACACTGTGCTAATGGAAATCACCTCTCGGAGAGATTCCTTGGAATCCATCAAGGGTGATTGTATTCGTCTCGAATCAACTTTGAAAGAGAAAGATATGGAAGGAGTTGTGATGCGTAGAAGCATATCTTTGCTTTGTGAAGCATGCACTAGCTCAGTTATTGAGATTGAAAATAGGAAATCCCAATTGCTTGGTGACAATTTTTCTGATGGAGATCTGAGAATCAACTTACCATCTCTGCCGTCAACTGATGGGCCTTACTTTAGTGGTGTCAATCTTTCAGCTTCTGAGGATTGTGTAAAGACACTGGCAGATAGGCTGTTGTTGGCTGTAAACAATTTTGTCAATGTTCAAATGGAGAGTGTAGAAGGTCATAGTAAAGAAATGAGAAGTACCATTCTTAATTTGCAGAAGGAACTTCAAGAAAAGGATATCCAAAGGGAGCGAATATCTATGGAACTTGTAAGTCAAATCAAGGAAGCTGAGGCCACCGCAGCGCGTTATTCCCGAGATCTTCAATCATTTAAGAATTATGTCCAAGAGTTGGAGAGCAAGCTGGAAGCAATGGGCACGGAACGGAACTTGTTGGAACAGAGAGTAGCGGAGCTACAACAAGAACATATAAGCTCATTAGAGTTAAGGGAGAAGGTTAATTCACTGACTAGTTTGCTGACTGCCAAGGAACATGAAATCGAGGCTCTGATGCAAGCACTTGATGAAGAGGAGAATCAGATGGAAGCCTTAAGAAATATGATTGAGGTTTTACACAAAGAAGTGGAGCAGAAGAATATCGATTTAGAGCACAAAGAAGCTTCTCGTGCTAAGGCTGTCAAAAAGCTCTCTGTTACTGTGAGCAAGTTTGATGAGCTGCACCAGATGTCTGAAGGTCTTCTTTCTGAAATTGAAAATCTTCAATCTCAGCTGCAGGATCGTGATGCAGAAATTTCCTTCTTAAGGCAAGAGGTCACTAGATGCACAAATGATGTTTTAGAAGCTACAAGAAAGGCGAAAGAACGGACTTCTGGTGAACTTCATGAGTTTTTGACGTGGTTGGACACAATGTTTTCTCATGTTCTGATGCGTGATGCCCATGGTGGTGATGAAATTGCTACTCATGATCATGAATACAAGGAAAATCTCCAGAAGGACATAACGTCCATAATATCAGAATTGGAAGACTTGCGAGTTGCTACACAAAGAAAGGATACCTTGTTACAAGCGGAAAGGAATAAGGTGGAAGAGCTGTCACGCAGTATGGAGGCTCTGGAGGTATCCCTGCAAGAAAAGGAGATTCATCTGAGTTCACTTCAAGATGTTGGGGATTCTGGACTAGGAACCTCAGAAATTGTGGAAGTTGAACCAGTGTTGAACAAATGGACTGCACCAGTGACTTCTTCTGCTTCTCAAGTGCGAAGTTTACGCAAAGTGAACAATGAACAAGTTTCAATAGCCATTGACCAAGATGCTGGGAGTTCTGATAGATTTGAGGATGAGGATGATGATAAAGTTCATGGTTTCAGGTCACTTACAACATCAAGGTTTGTCCCAAAGTTCACAAGACCTGTCAGTGACGTGATTGATGGCCTATGGGTTTCCTGTGACCGAACACTAATGCGTCAACCTGCTTTTCGGCTTGGCATCATGATTTATTGGGCTCTGTTGCATGCACTTCTTGCTTCATTCATAGTTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_52538.p1 GENE.S_Transcript_52538~~S_Transcript_52538.p1 ORF type:complete len:2415 (+),score=735.13 S_Transcript_52538:1048-8292(+)
MQEADNFGPKHFGQSVQQDLDGDSRLSMPAYHEGCETPAASNDISAKLTSPEPDRKPDVSDVAIIACDEGYETMEASVPVETANVTAESRTGSSHKLNQPHEDRMDGSCTEREVHVHSMSNDSRCYKNEADPADLERRDDKGSDEHCLHENKIVDSVQEQPVCVGLQGNSINLHQLAELLKQLPEGDFRYLIKSREMVGHREDVVLQDCTIDVPERFQEHLYLSNISKDFFHLQLQEQHEQQADVDRQHGSLVGEVPAITPSLSVVQEVDNSVATELSQCKLELEAAMRERVELHSLYQSAKEDVMIYSAKVDELRIKLEETVGHLSSLSADLVSCKVLLEASQDENEKLSEGLASVTDQRNEFEVAMEQYVHENRKLSGDLADSGMQLAALQQEIGSLKRSVASVEDERKKFEEEKEILIREKETLLGDLSDCKSAMGALQQDYAGVNMNLATVTEEHNKLKEHEVFLTQETERLSAELVAVQDKMSVQHQEHVQLQADLQETMTRLEQLAEENIILQSNLEIHKAKLAEVDSQQIQLSLVAGSVSSEAKSHSGAADIDSSIRISKEEDEYMVSSVLAASDDTFQSTALRQSGLDLHDDTSTAVRLKGYLEEAEKMIQIIEKLMDGMHFQSTSLSPLAGKGAAPGVSKLIQAFESKANIDDHDSSESLLPSDPYSSAKEQISHLRAVLKALTQNVDHAQAVIMEEKDGRKTDIVVCRELEVEIEALKGFNNNLEMRNIELEVLCGAMNQHVLDIEVKKTRLEDLCEALQIQEAGLQSQNIELLKKLNDFQSRISGFEVQLNGVRSSSDVVASVICDEVTTMQREIREDIYAVHRRWKAAVAELVPYVEKLDAVVGSASSHPDHGETHNDGDTEVDFVEAPASHLQSSVLLLIQRYKEAEGRASLLDNDLKSRMTDFGELQGRVEVLDSINFQQQNEILVLRESLTHAKDTFDAIHVELLEKTRELEQSEQRVSSVREKLSIAVAKGKGLVVQRDTLKQSLAEMSGELEKCTQELRLKDSRLYEVEEKLKAYSEAGERMEALESELSYIRNSATALRESFLLKDSALQRIEEILEDLELPDHFHSKDIIQKVDWLAKSVASNSLPPADWDQRSSVGGGSYSDAGLVMTDGSKEDVPPTSNPVDDLRRKYDELQTKFYELAEQNDMLEQSLMERNILVQRWEEILDRINTPPQIRSMEPEERIHWLGTALSEADHHMRSLQQKVETLENYCGSLSGDLEESQRRMAEHESTLHTLLHEKESALSDAEDQLKSLQQRIGNLDDHCGSLSSALEESQRRISEHEYSLREVLHEKDILSSNLVTMTTDREIALSTVAQYEQEINRLKEDVDMLQEKLVENLGNKDHIDQIESELKRLQHLILDVLQVSETEDVSSDESNIQHLERLIRLLRNHINGVRAESHGLREVVDNDVSDETAEARIVTETENEHLSDANQDEPNMRSTISEEQVVTDLRRQLAEALDEVVHLREEKDAYMQKSQSLASEVEALESNMKEFQELLKQEEQKSASLREKLNLAVRKGKSLVQQRDSLKQNIEDMTSEIDRLKSEINSQEQSLLDSVQKINDLSFQMEIYKAFETENMSLKTRLIEAEQHLQQNGHTLSMVLNKLSDVDTGGEISSHDPLQKLEEIGKLCADLHAAATSSEKEANKSKKAAELLVAELNEVQERNDVLQEEVSRAYDEMSRLSRERELADSAKVEALSHLAKLSEERKKHLAEFERLNTCVHELKKGFIEINTVTGDVFAKDIQLLLSVRTHMESCLGQIGMNFVATKYYVVSEDIRSTRSLWDNVLPDQLAEDVGFEQYLQRLLEAFGAFKQRVNSHSMSFNKEAEHFNNVINTVLMEITSRRDSLESIKGDCIRLESTLKEKDMEGVVMRRSISLLCEACTSSVIEIENRKSQLLGDNFSDGDLRINLPSLPSTDGPYFSGVNLSASEDCVKTLADRLLLAVNNFVNVQMESVEGHSKEMRSTILNLQKELQEKDIQRERISMELVSQIKEAEATAARYSRDLQSFKNYVQELESKLEAMGTERNLLEQRVAELQQEHISSLELREKVNSLTSLLTAKEHEIEALMQALDEEENQMEALRNMIEVLHKEVEQKNIDLEHKEASRAKAVKKLSVTVSKFDELHQMSEGLLSEIENLQSQLQDRDAEISFLRQEVTRCTNDVLEATRKAKERTSGELHEFLTWLDTMFSHVLMRDAHGGDEIATHDHEYKENLQKDITSIISELEDLRVATQRKDTLLQAERNKVEELSRSMEALEVSLQEKEIHLSSLQDVGDSGLGTSEIVEVEPVLNKWTAPVTSSASQVRSLRKVNNEQVSIAIDQDAGSSDRFEDEDDDKVHGFRSLTTSRFVPKFTRPVSDVIDGLWVSCDRTLMRQPAFRLGIMIYWALLHALLASFIV*

Click here to download the sequence:
Link to NCBI Protein BLAST