Transcript Information: S_Transcript_525453.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value1E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.14385406073071
Replicate 20
Replicate 30.19938093063352
Condition 2: 8 Hour
Replicate 10.23054476018522
Replicate 20.24185782313218
Replicate 30.11522079786476
Condition 3: 24 Hour
Replicate 10.23616090260102
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525453.p1 GENE.S_Transcript_525453~~S_Transcript_525453.p1 ORF type:5prime_partial len:185 (+),score=10.85,zf-RVT|PF13966.2|5.6e-14,zf-RVT|PF13966.2|3.1e+02 S_Transcript_525453:2-556(+)
AGTGCTTATAATTGGCTCACAAAGGAGCAGGAAAGGTTCAAATGGGATAAGATTGTATGGAACAGATACAATATCCCGAAACAGTCATTCATTGCTTGGATTTTCATGTTGGGTAAAGCTAGAACCCGAGACAAACATAAGCAAATGGGGATCTGCTTGAATGATGCATGCTCGTTATGTGATATCCAGATTGAGTCCCCTGCACACCTGTTCTTCTCCTGCCCTTTTAGTGCCATAATGATACAGCAATTCTGCAAATGGCGTGGAATAAGCAAGACTAGATGGAATTTATACTCGCTGCCTAGGTGGATACAGAGGAGTGGGAAATCCTCAGTTTGCAGGAAGGTGATGTATACTGGATTTGTAGGACTGCTGTATACCATTTGGAGGGCTCGAAATGTAGCAATTTGGGACAAAAAGGTGCCTGTACCAGAACGCATGTTCCACTTGCTACAGAGACAACTACAATACAGGATATTGAGTTGCATATCAGAGAGGACTCCAACTGATGATAAGAGCTGGATAATTTTTTTTTTTCTTTTGATTAGTTGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525453.p1 GENE.S_Transcript_525453~~S_Transcript_525453.p1 ORF type:5prime_partial len:185 (+),score=10.85,zf-RVT|PF13966.2|5.6e-14,zf-RVT|PF13966.2|3.1e+02 S_Transcript_525453:2-556(+)
SAYNWLTKEQERFKWDKIVWNRYNIPKQSFIAWIFMLGKARTRDKHKQMGICLNDACSLCDIQIESPAHLFFSCPFSAIMIQQFCKWRGISKTRWNLYSLPRWIQRSGKSSVCRKVMYTGFVGLLYTIWRARNVAIWDKKVPVPERMFHLLQRQLQYRILSCISERTPTDDKSWIIFFFLLISC*

Click here to download the sequence:
Link to NCBI Protein BLAST