Transcript Information: S_Transcript_525490.p1


Annotated TAIR IDAT3G54890.1
Annotated Gene Namephotosystem I light harvesting complex gene 1
Annotated Gene Symbol(s)LHCA1
Annotation TypeOrtholog
Chromosome Positionchr3:20339706-20340922 | Reverse length=241
E-Value1.5E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.099674161929515
Replicate 20.082632170627396
Replicate 30
Condition 2: 8 Hour
Replicate 10.1597407514392
Replicate 20
Replicate 30.47900781134789
Condition 3: 24 Hour
Replicate 10.57271230125153
Replicate 20
Replicate 30.47232292893476


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525490.p1 GENE.S_Transcript_525490~~S_Transcript_525490.p1 ORF type:complete len:267 (+),score=-2.76,Chloroa_b-bind|PF00504.17|1.4e-46 S_Transcript_525490:77-802(+)
ATGGCGACGAGCGGGCTGAGGAGCTGCAGCGCGGTGGGCGTGCCGAGCCTGCTGGCGCCGTCGTCGAACAGGAGCCGCCTGCCGGTCTGCGCCTACGCCACCACCTCCGGGCGCGTCACCATGTCCGCCGAGTGGATGCCGGGCCAGCCACGCCCCGCCCACCTCGACGGCTCCTCTCCCGGTGACTTCGGGTTCGACCCGCTGGGCCTCGCCACCGTGCCGGAGAATTTCGAGCGGTTCAAGGAGTCGGAGGTGTACCACTGCCGGTGGGCCATGCTCGCTGTGCCTGGGGTGTTGGTGCCGGAGGCGCTGGGGCTGGGCAACTGGGTGCAGGCGCAGGAGTGGGCGGCGGAGCCCGGCGGCCAGGCCACGTACCTCGGCAACCCGGTGCCATGGGGCACGCTGCCGACGATCCTGGTCATCGAGTTCGTCGCCATCGCCTTCGCCGAGCACCAGCGCACCATGGAGAAGGACCCCGAGAAGAAGAAGTACCCCGGCGGCGCCTTCGACCCCCTCGGCTTCTCCAAGGACCCCGTCAAGTTCGAGGAGTACAAGCTCAAGGAGATCAAGAACGGACGATTGGCCATGCTGGCTTTTGTGGGTTTCTGCGTCCAACAGTCGGCGTACCCGGGCACCGGCCCACTGGAGAACCTGGCCAGCCACCTCTCGGACCCGTGGCACAACAACATCGGCGACATCATCATCCCGAGAACCATCTACCCTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525490.p1 GENE.S_Transcript_525490~~S_Transcript_525490.p1 ORF type:complete len:267 (+),score=-2.76,Chloroa_b-bind|PF00504.17|1.4e-46 S_Transcript_525490:77-802(+)
MATSGLRSCSAVGVPSLLAPSSNRSRLPVCAYATTSGRVTMSAEWMPGQPRPAHLDGSSPGDFGFDPLGLATVPENFERFKESEVYHCRWAMLAVPGVLVPEALGLGNWVQAQEWAAEPGGQATYLGNPVPWGTLPTILVIEFVAIAFAEHQRTMEKDPEKKKYPGGAFDPLGFSKDPVKFEEYKLKEIKNGRLAMLAFVGFCVQQSAYPGTGPLENLASHLSDPWHNNIGDIIIPRTIYP*

Click here to download the sequence:
Link to NCBI Protein BLAST