Transcript Information: S_Transcript_525504.p1


Annotated TAIR IDAT3G53320.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37070.1); Has 11044 Blast hits to 5993 proteins in 551 species: Archae - 8; Bacteria - 1486; Metazoa - 4078; Fungi - 1814; Plants - 348; Viruses - 112; Other Eukaryotes - 3198 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:19769397-19772278 | Reverse length=553
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.44421723941305
Replicate 30.12377675223893
Condition 2: 8 Hour
Replicate 10
Replicate 20.6005865406638
Replicate 30
Condition 3: 24 Hour
Replicate 10.87965973787628
Replicate 20.15210611796206
Replicate 30.16927546580615


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_525504.p1 GENE.S_Transcript_525504~~S_Transcript_525504.p1 ORF type:internal len:149 (-),score=30.73 S_Transcript_525504:1-444(-)
TGTCAATATATGTGCAAAGAAGCTCCTTATTTATTTTATTTAGTGGCTCATATACTCAAGAGGATTATGCTTTGGTGGACAGAGGTCAACATAGTGGATAATCCAGGTGATGCCCCTGCTCAAGGAGCACATACAAACAAACATTCTGATTCACAAAACCCAAAGAAAAATGGCAAGTGGAACCTGCGAAAAAGCTTGGCCTGGGATAGTGCCTTCTTTACCAGTGCAGGGGTTCTTGATCCTGAGGAGTTGTCTACCATAATTGAAGGAGCTGAAACCACTGCAACACAGAAGCCAACTTTACCTGGAATCCAAGAGGATTTAAGCAAATCAACTGATTCAATTTCCACATTTGAGAGTGATTTGACTCTGGAAAGCCTGGAGGCTGATCTTTTCTGTGATATAAGAGCATCAATCCAGCGGTCCAGTAGGTCTTGCACCCCG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_525504.p1 GENE.S_Transcript_525504~~S_Transcript_525504.p1 ORF type:internal len:149 (-),score=30.73 S_Transcript_525504:1-444(-)
CQYMCKEAPYLFYLVAHILKRIMLWWTEVNIVDNPGDAPAQGAHTNKHSDSQNPKKNGKWNLRKSLAWDSAFFTSAGVLDPEELSTIIEGAETTATQKPTLPGIQEDLSKSTDSISTFESDLTLESLEADLFCDIRASIQRSSRSCTP

Click here to download the sequence:
Link to NCBI Protein BLAST